Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi571g00038 ATGGATCCTATGAGTGAAGATTTTATTTTTAATATGATGGAACCTACTGAAACTGACAAAACTTTTGAGGGTGATCCCAAAAATTCTAAATCCCCCAATAAAGATAATTTGGATTCTGATAAGGATCCTGAAGTTTGGAAAAGGATAAGTGAACTAACAGATGAGGATATCAGAGGGCTTGAGTTTGATACTGAAGAGGATGCATATGATTTCTACCGTGAGTATGCTAAATTCATAGGATTTTCTGTAAGGAAAGGTGATGTGTATAGAAATTGTAATGGTACAATTACAATGAGGCAATTGGTTTGTAATAGAGAGGGAGAGAGAAGTGAGAAGCATCTTAATAGGACTGATAGAATTAGGGAGGCAAAGGCCCTCACCCGAACTGAGTGTAAAGCAAGGCTCCGTGTTTCCTTAGATTATAGAAGTAGAAAGTGGAGGGTTGGAATCTTTGAGCTAGCTCATAACCATGAATTGACTCCTGCAAGTATGATACATTTGCTACCTGCTTATCGTGGGTTGAGTGTAGCGGATAAGGCACAAGTTGACGGTCTACATCATTACGGTGTCAGGACTTGTCATATAATGGGTCTTATAATGGGTCAAAAGGGAGGTTATTCTGATCTTGGTTTTTGTAAGAAGGATTTGTACAATCATATTGATAAGGAGAATCGGGCAAAAATAGAGGATGGGGATGCATTTGCTGCGTTATGCTACCTTCAATCTAATCGTCAGAAATTTAAGGATGAGTGGAACAATGTTGTTGACAAACATGGTGTGAGGGAAAATAGGACAACTTCTATATGTGAAGGGATTAACTCATTCATTAAGAGGTATGTTCAGAGCAAAAATAGCCTTGTTGATTTTCTTCACAATTTTGAGAGAGCTGTGAATGAATATAGACACAACGAGTTAACTTCAGATTTCAAGTCGAAATACACTCAACCTGTGATGACTACTGCTTTGGAAAGATATGAAGTTCAAGCTTCAAATGTCTACACGAGGAATAAGTTTTTTGATGTTCGAAAGCAAATTGAGAAAGTTTCTGCCATAAATGTCATTGAGAGGACAGATGTTGGTAATGTCATTACAATGCAGATGAATAAATTTGGCACTCCTGATTCTTCTTACATTGTTACGTTGGATAAGTCTGATGGTAATTTCGTTTGTGATTGTCGCATGTTTGAATCATGTGGTCTCCCTTGTTCACACATTTTCAGTGCTATGAAGCATGAGCAAGTGGAATCCATTCCTTCATCTTTGATTTTGAAAAGATGGACTAAGTTGGCTAAAGTTCAACACATTTCTTCTGTTTATGCTGAAGAAGGTGACACATCAAAGAAAGATTTATTGAGGTCAGGTGCTGTTGGTGCTGCATGTAACAGGCTTAACAAGGCTGCACGTAGAAATCCTCACAATTTTGTAAAGAACATTGAATCTATTCATAAGTTGGCAGAACAGATGGAAAGGCGGGAAGGTATTGACTTGGATGTTGCTGATATATCAAGAGCTGTTCGTGATCCAACTGTTGTTAAAACTAAAGGTGCCCCTCGAAAGAATAAGAAAATGACCAAAAAAAGGAAATGTTCTTACTGTAAATGTCCAGGGCACACAGTTAGGACATGCACTAAATATGCTACTCGTGATCAGTTGGATACAGTTATTGAAGAGGAATCATCTGTTGAGACTGATGAAGATTCAAGAGATGAAAGTAGGTCACGGGATGTTCACATTTCTAACCATTTGAATGATGTAACAGTCTCTGCTGGTCAGAATTGTGCTTCAGACAAGGGTCAGTCTAAGAAGAGAAGGAGAAATAGTGAAGGTTTGAAAATGACCCAAGAATCTGTTAATGAAAGGAGGTCCAGTGATGTGAACAAATGTCAACAGAATGATACTGGTGTTGCATTCAGCAGAATAAATACCCCCTCCTTATTTGGTAATCATGTGTACTATTCAAACATGAATGGTCCGAGTATTTCAAGACCTGTGCATATTAGACCTTCCATGATTCATGGATTTGGGCAAGGATTTGTTGGTAATATAGTTGAGGACATGCTACAGTATCCCCAAATGTATATGCAGCAATCTATGTATACACCTCCAGTAGTTCATAACTTTGACCAATATGGTAATAGCTTTCAGTTTCCTAATTCTATGAACAACGTTGAAAGGAATAATGGTGCAAGAAGCAAGGGTTTTGGAAAAAAATGA 2214 0.379 MDPMSEDFIFNMMEPTETDKTFEGDPKNSKSPNKDNLDSDKDPEVWKRISELTDEDIRGLEFDTEEDAYDFYREYAKFIGFSVRKGDVYRNCNGTITMRQLVCNREGERSEKHLNRTDRIREAKALTRTECKARLRVSLDYRSRKWRVGIFELAHNHELTPASMIHLLPAYRGLSVADKAQVDGLHHYGVRTCHIMGLIMGQKGGYSDLGFCKKDLYNHIDKENRAKIEDGDAFAALCYLQSNRQKFKDEWNNVVDKHGVRENRTTSICEGINSFIKRYVQSKNSLVDFLHNFERAVNEYRHNELTSDFKSKYTQPVMTTALERYEVQASNVYTRNKFFDVRKQIEKVSAINVIERTDVGNVITMQMNKFGTPDSSYIVTLDKSDGNFVCDCRMFESCGLPCSHIFSAMKHEQVESIPSSLILKRWTKLAKVQHISSVYAEEGDTSKKDLLRSGAVGAACNRLNKAARRNPHNFVKNIESIHKLAEQMERREGIDLDVADISRAVRDPTVVKTKGAPRKNKKMTKKRKCSYCKCPGHTVRTCTKYATRDQLDTVIEEESSVETDEDSRDESRSRDVHISNHLNDVTVSAGQNCASDKGQSKKRRRNSEGLKMTQESVNERRSSDVNKCQQNDTGVAFSRINTPSLFGNHVYYSNMNGPSISRPVHIRPSMIHGFGQGFVGNIVEDMLQYPQMYMQQSMYTPPVVHNFDQYGNSFQFPNSMNNVERNNGARSKGFGKK 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi571g00038 737 PANTHER OS01G0519700 PROTEIN 55 242 - -
Sebi571g00038 737 MobiDBLite consensus disorder prediction 553 629 - -
Sebi571g00038 737 MobiDBLite consensus disorder prediction 1 42 - -
Sebi571g00038 737 MobiDBLite consensus disorder prediction 580 596 - -
Sebi571g00038 737 MobiDBLite consensus disorder prediction 597 626 - -
Sebi571g00038 737 MobiDBLite consensus disorder prediction 18 42 - -
Sebi571g00038 737 SMART 26again6 388 415 IPR006564 GO:0008270
Sebi571g00038 737 ProSiteProfiles Zinc finger SWIM-type profile. 377 413 IPR007527 GO:0008270
Sebi571g00038 737 MobiDBLite consensus disorder prediction 565 579 - -
Sebi571g00038 737 MobiDBLite consensus disorder prediction 718 737 - -
Sebi571g00038 737 Pfam FAR1 DNA-binding domain 70 160 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi571g00038 Sebi-Chr571 605135 608295 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi571g00038 FAR1 1.6e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi571g00038 - - vvo:131629359 305.064