Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi571g00033 ATGGCTTCCCGTTATGATTTAATCTGTAATGTAAATGGAGGCTCTGAGCATAAGATATGGAGAATTAAAGTCAGAGTCATTAAGCTATGGAGGTCTTCATATTTTAAGGATAACAATAATAAACCAATGATTGAATTTGTTGTTTTGGACGAACGGGGAGGTCGTATCCAATGCACGGTGAAGAGCATTCATGTGTATCTGTTTGAGAATAGTATCAACGAAGGTAATGTGTACATGCTAGAAAACCTCAGCGTTGCACTTAACAGTGGAAAGTACAAACCTACAATGCATGAATTTAGAATGTTCTTTAAGAGAGAGACACGAGTTACTCTGGTAGAAGATTCTTCCATTCCCCTCTATGGTTTTTCATTTGTCCCATTCGTTGAAATATTGAATGAAACTAAGGACGACAGACGTTTAGTTGATGTACTAGGTGTTGTTACTGGGAAAGGTAATCTGATTGAGTTCAAGAAAGAGGGAAAGCCATGCAACTATGTTGTCATAGAGTTGGAAAATATTGAGGGAGGTCTTAAACTTAGGTGTACTTTATGGGAGGACTATGCTTTTATGTTTTTGAAACATTTGGAAGACCATCCATCTGAGTCCTATGTTGTTGTTCTTCAATTTGCAAAAATGAAAAATTTTAAAGGGTCAGTAGGTGTTTCAAACACAACTTACAACTCTAAGTTGTTTATCAATGCCAATATTCCTGAAATTGAAGACTTTCAAATGAGGTTGAAATCTTCTGATTCTCAACAAGGTATTCAGTTTAGTCAGTTAAGTGATCATGCTTCTTTGACCCTTGAGGAAGAATTTCTTGAAAGAGGAGTGTACAAATCAATTGCTGATTTGAAAGAAGTAACACAGGGTGGAGATAAGAATAGGCATCCCGAAGAGATTGATTCCTTTAAAGATAAGAAATTCCTTTTTAAAGTGCAAGTTAAGATTCAAGATATGGAGTCAATTGTTCCTTATGTCATTAGTATTTCAAGGCTTTGTTTTGAAGATAACATTATAGCTTCCTTTGAAAAGAAATACCAAACTGAAGAGGTAGCATTAATTCAAGACAACTCTGAACTTTTGAGTCAGTTTACTGAGTCCTCAGATCTGTTGAAGGACAATTTATCTGTGTCATGTGATAATGGAGTAGATACTCCAAGTCCCCTTTTACCGACTGGAAAAACGGCATCGAATATGGATTCAAGTGTTATAAAGGTTCTTGATGTGGATCTTGCTGAGTATTGTGGAAATGCAAGTTTTGATACTCCCTCAAAATGCAAGGGTGAGATGCATTCTGAACAGACCATAGTTCGCGTTGCTGTTCATGGTGATGAACAATCTGCTAAGAAGCTGAGGGAAGTTATCAAGGAAGAGAAGAATTAG 1383 0.3651 MASRYDLICNVNGGSEHKIWRIKVRVIKLWRSSYFKDNNNKPMIEFVVLDERGGRIQCTVKSIHVYLFENSINEGNVYMLENLSVALNSGKYKPTMHEFRMFFKRETRVTLVEDSSIPLYGFSFVPFVEILNETKDDRRLVDVLGVVTGKGNLIEFKKEGKPCNYVVIELENIEGGLKLRCTLWEDYAFMFLKHLEDHPSESYVVVLQFAKMKNFKGSVGVSNTTYNSKLFINANIPEIEDFQMRLKSSDSQQGIQFSQLSDHASLTLEEEFLERGVYKSIADLKEVTQGGDKNRHPEEIDSFKDKKFLFKVQVKIQDMESIVPYVISISRLCFEDNIIASFEKKYQTEEVALIQDNSELLSQFTESSDLLKDNLSVSCDNGVDTPSPLLPTGKTASNMDSSVIKVLDVDLAEYCGNASFDTPSKCKGEMHSEQTIVRVAVHGDEQSAKKLREVIKEEKN 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi571g00033 460 CDD RPA1_DBD_B_like 142 247 - -
Sebi571g00033 460 SUPERFAMILY Nucleic acid-binding proteins 16 115 IPR012340 -
Sebi571g00033 460 Gene3D - 8 115 IPR012340 -
Sebi571g00033 460 CDD RPA1_DBD_A_like 21 109 - -
Sebi571g00033 460 SUPERFAMILY Nucleic acid-binding proteins 122 248 IPR012340 -
Sebi571g00033 460 Pfam Domain of unknown function DUF223 46 136 IPR003871 -
Sebi571g00033 460 Gene3D - 116 259 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi571g00033 Sebi-Chr571 429938 432518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi571g00033 20 300 Core DNA Replication Machinery Family AT2G06510 26.780 1.45e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi571g00033 - - ahf:112706747 318.931