Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi571g00010 ATGGCATCACTGCCTCCAGGTTTTCGTTTCCATCCAACTGATGAAGAATTGATAGGATATTACCTAAAAAGAAAAGTGGAGGGGCTTGAAATTGAGCTTGAAGTTATTCCCGTGATCGATTTCTACAAATTTGATCCCTGGGAGTTGCCGGAAAGTAGAAAGCAGCATTTTGTTCTTTACCTTTCTTTATTGATTAAAGACTTTGTGAACCTTTTCCGGGTTCAATGGGATTTGTTTAGTCAATTCAAAGAGAAATCTTTCCTACCAAAAAGAGATTTGGAGTGGTTTTTCTTCTGTCCACGAGATCGCAAGTACCCAAATGGATCACGGACAAATAGAGCCACCAAAGCTGGATACTGGAAAGCTACTGGAAAAGACAGGAAGATTGTGTGTCCATTCACTTCCACTGAGACAGTGACAGGGTACCGTAAGACCCTTGTTTTCTATTGTGGAAGGGCACCCTTAGGAGATCGAACAGATTGGGTCATGCATGAGTATCGCCTTTGTGATGATCCTGCCCAAGGCTCACAGGGTGCTTTTGCTTTGTGCCGTGTTGTTAAAAAGAATGACAAGGCCAATGATTTCCAAGGACACAAGTGTAAAAGCAGAAGGGTTGGGAACAATTCCACTAATGGGAGGAATGACACAACAATGAGATTCTCTAATGAGCTCTCCATTATCTCTGGTGATATTTCCTCTCAGGTTAGTCAAATGTGCAGTGCCAGTGAGAGTCGTTATTCAAGTCCTATTGATTCTCCATGCAATGTTGCTCCATTGACTGGGTTTGAGCAAGCTTCCACAAACACCAATCCCTCTAGCTTCTGGCTCTCCCCTGATATGATTCTTGATTCTTCAAAGGACTACTCTCAAATACAAGATGTTGTTGGATATTTTCCACAGCATGACTTATCAAGTACAATGACACCTTGGCAATCATTTGAACATACAGAAATTTCACCCAGTTCATCCTACTCAAATTTTAATGGGGAAATTGAATTTTCTGATGATTTCAGTAAAATTGGCTGCATGTCACCTTACTCAGGACAAGGAAACTTCATGGACTTTTATGTGAATGAGGCTGTGCCTTATGAAAGTTATAACCAAATTAATTCAATCAGAGATCCAAAACAATTCTGA 1137 0.4072 MASLPPGFRFHPTDEELIGYYLKRKVEGLEIELEVIPVIDFYKFDPWELPESRKQHFVLYLSLLIKDFVNLFRVQWDLFSQFKEKSFLPKRDLEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKIVCPFTSTETVTGYRKTLVFYCGRAPLGDRTDWVMHEYRLCDDPAQGSQGAFALCRVVKKNDKANDFQGHKCKSRRVGNNSTNGRNDTTMRFSNELSIISGDISSQVSQMCSASESRYSSPIDSPCNVAPLTGFEQASTNTNPSSFWLSPDMILDSSKDYSQIQDVVGYFPQHDLSSTMTPWQSFEHTEISPSSSYSNFNGEIEFSDDFSKIGCMSPYSGQGNFMDFYVNEAVPYESYNQINSIRDPKQF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi571g00010 378 SUPERFAMILY NAC domain 89 188 IPR036093 GO:0003677|GO:0006355
Sebi571g00010 378 Gene3D NAC domain 13 193 IPR036093 GO:0003677|GO:0006355
Sebi571g00010 378 SUPERFAMILY NAC domain 2 53 IPR036093 GO:0003677|GO:0006355
Sebi571g00010 378 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 263 - -
Sebi571g00010 378 ProSiteProfiles NAC domain profile. 4 188 IPR003441 GO:0003677|GO:0006355
Sebi571g00010 378 Pfam No apical meristem (NAM) protein 5 168 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi571g00010 Sebi-Chr571 149704 151206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi571g00010 2 332 NAC Transcription Factor Family AT4G17980 50.737 4.78e-95 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi571g00010 NAM 1.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi571g00010 - - adu:107487585 492.271