Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi570g00021 ATGAACACTGATGGTAATGAACCCCAAAAATCTAATTCCCCCAATAATCACAATGTTGAATCTGATAAGATTGTTGATGGTTACAAAAAGATATTTGAATTAACAAATGAGGATATCAGAGGTCTTGAGTTTGATTCTGAAGAGGATGCATATGTTTTCTATTGTGAGTATGCAAAATTCATAGGGTTTGCTGTTAGGAAACAAGATGTGTATAGAGATCGTAATGATCTAATTACAATGAGACAATTGGTATGTAACAAGGAGGGAGAGAGAAATGGGAAGCATCTTAATAGGACTGATAGAAAGAGGGAGGCAAAGGCCATTACATGGACAAAATATAATGCAAGGCTCCGAATTCATTTAGATTATAAGAGTGGCGAGTTGATTGTTTTGAGCTAG 399 0.3534 MNTDGNEPQKSNSPNNHNVESDKIVDGYKKIFELTNEDIRGLEFDSEEDAYVFYCEYAKFIGFAVRKQDVYRDRNDLITMRQLVCNKEGERNGKHLNRTDRKREAKAITWTKYNARLRIHLDYKSGELIVLS 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi570g00021 132 MobiDBLite consensus disorder prediction 1 21 - -
Sebi570g00021 132 Pfam FAR1 DNA-binding domain 53 126 IPR004330 -
Sebi570g00021 132 MobiDBLite consensus disorder prediction 1 20 - -
Sebi570g00021 132 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi570g00021 Sebi-Chr570 287101 287499 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi570g00021 FAR1 6.8e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi570g00021 - K17604 vvo:131613837 99.7525