Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi570g00014 ATGGCCGCAGAAATTTGTGGCGGGTCTCTATTCTTATCCGTTAAAACTCAACTGCAACTGCAACAACAACAACTATTCCTCCATGCTCAACGAACCAGAACAACAACAACCACTACCAGATTCCACTCATCCAAACCTTCCTTTTCTCCTCGCTCTTTCAATGCCTCCACCACCTTTCGCCGCAGCGTTTTCTGCCAGGTTGCTAGCACTGACACGCTCTCCGACTTCGAATCCGCCGCCAAAGCTGGCCAAGATCGTCTCTCTAAGGTGCCGGTGTCTAATATAAGGAACTTTTGCATCATTGCTCATATTGACCATGGCAAATCCACCCTGGCTGATAAGTTGCTTCAGGTTACTGGAACTGTGCACCAGCGAGAGATGAAGGACCAGTTTCTCGATAACATGGATTTGGAGAGAGAAAGAGGCATCACTATCAAGCTTCAGGCAGCTCGAATGCGATATGTGTTTGAAAATAAACCATATTGCTTAAATTTAATAGATACTCCAGGGCATGTCGACTTCTCGTATGAGGTTTCTCGATCACTTGCAGCATGTGAGGGTGCTCTCCTTGTAGTAGATGCTTCTCAGGGGGTTGAAGCACAGACACTAGCTAATGTTTATTTGGCTCTGGAGAACAACCTAGAAATTATCCCTGTTTTGAACAAAATAGATCTTCCAGGTGCAGAACCCGATCGAGTTATCAAGGAGATTGAAGAGATTGTAGGTCTAGATTGCAGCAACGCGATTCTCTGCTCTGCAAAGGAAGGAATAGGTATAATTGATATTCTCAATGCAATCGTTGAAAGAATTCCCCCACCAGCTGATACATCTGAAAAGCCGTTGAGGGCTTTAATATTTGATAGTTACTATGATCCATATAGAGGTGTTATTGTATACTTTCGAGTTATAGATGGGACTATAAAGAAAGGTGACAGAGTATATTTTATGGCTAGTGGTAAGGATTATTTTGCCGATGAAATTGGAGTTTTGTCTCCAAATCAACTCCAAGTCGAACAATTGTATGCTGGTGAGGTGGGCTATCTATCTGCATCAATAAGAACAGTAGCTGATGCCAGAGTAGGTGACACTATTACTCACTATACCAGAAAGGCGGATAATTCACTCCCTGGATATGAGGAAGCCACTCCTATGGTGTTCTGTGGCCTGTTTCCTGTCGACGCTGACCAATTTCCTGACCTACGTGATGCACTTGAGAAGCTACAACTAAACGATGCTGCCCTAAAGTTTGAACCTGAGACCTCAAGTGCTATGGGATTTGGCTTTAGATGTGGGTTTCTGGGTCTTCTCCACATGGAAATTGTTCAGGAGAGACTTGAGAGAGAATACAATTTGAGCCTGATAACTACTGCGCCAAGTGTTGTATACAGAGTGAACTGTGTAAATGGTGATACTGTTGAATGCTCAAATCCATCTCTACTTCCTGAGCCTGGACAGAGGAAATCAATTGAGGAGCCAGTTGTTAAGATTGAGATGCTTACACCAAAGGACTACATTGGTTCGCTTATGGAACTTGGACAAGAAAGAAGAGGGCAGTTCATAGAAATGAAATTTATTACTGAAAACAGGGCATCGATCATCTATGAATTGCCACTAGCTGAGATGGTTGGTGATTTCTTTGACCAGTTAAAGTCAAGAAGTAAGGGTTATGCCAGTATGGAGTATACCTTTGTCGGGTACAAAGAAAGTGATTTAGTTAAACTTGACATACAGATAAATGGTGATTGTGTGGAGCCATTGGCTACAATTGTGCACAAAGATAAGGCATATTCTGTGGGAAGGGCTTTGACTCTAAAGTTGAAGGAGCTCATACCACGGCAAATGTTTAAAGTACCAATTCAAGCATGCATAGGATCCAAAGTGATTGCTAGTGAAGCTTTATCTGCAATAAGGAAGGATGTATTAGCCAAATGCTATGGTGGGGACATTTCGAGAAAAAAGAAATTGCTTAAGAAACAGGCTGAAGGAAAGAAGAGGATGAAGTCTATTGGTAAAGTTGATGTGCCTCAAGAAGCTTTTATGGCGGTTTTGAAACTTGAAAAGGAGGTAATATGA 2073 0.4235 MAAEICGGSLFLSVKTQLQLQQQQLFLHAQRTRTTTTTTRFHSSKPSFSPRSFNASTTFRRSVFCQVASTDTLSDFESAAKAGQDRLSKVPVSNIRNFCIIAHIDHGKSTLADKLLQVTGTVHQREMKDQFLDNMDLERERGITIKLQAARMRYVFENKPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPDRVIKEIEEIVGLDCSNAILCSAKEGIGIIDILNAIVERIPPPADTSEKPLRALIFDSYYDPYRGVIVYFRVIDGTIKKGDRVYFMASGKDYFADEIGVLSPNQLQVEQLYAGEVGYLSASIRTVADARVGDTITHYTRKADNSLPGYEEATPMVFCGLFPVDADQFPDLRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGQRKSIEEPVVKIEMLTPKDYIGSLMELGQERRGQFIEMKFITENRASIIYELPLAEMVGDFFDQLKSRSKGYASMEYTFVGYKESDLVKLDIQINGDCVEPLATIVHKDKAYSVGRALTLKLKELIPRQMFKVPIQACIGSKVIASEALSAIRKDVLAKCYGGDISRKKKLLKKQAEGKKRMKSIGKVDVPQEAFMAVLKLEKEVI 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi570g00014 690 Pfam Elongation factor Tu GTP binding domain 94 271 IPR000795 GO:0003924|GO:0005525
Sebi570g00014 690 PANTHER TRANSLATION FACTOR GUF1-RELATED 73 685 IPR006297 GO:0005525
Sebi570g00014 690 CDD EF4_II 281 366 - -
Sebi570g00014 690 FunFam Elongation factor 4 92 275 - -
Sebi570g00014 690 CDD EF4_III 383 458 - -
Sebi570g00014 690 NCBIfam small GTP-binding protein domain 96 264 IPR005225 GO:0005525
Sebi570g00014 690 Hamap Elongation factor 4 [lepA]. 90 688 IPR006297 GO:0005525
Sebi570g00014 690 Gene3D Elongation Factor G (Translational Gtpase), domain 3 376 457 - -
Sebi570g00014 690 FunFam Translation factor GUF1, mitochondrial 458 568 - -
Sebi570g00014 690 CDD lepA_C 491 570 IPR035654 -
Sebi570g00014 690 CDD LepA 96 273 - -
Sebi570g00014 690 Pfam Elongation factor Tu domain 2 295 365 IPR004161 GO:0005525
Sebi570g00014 690 NCBIfam translation elongation factor 4 94 685 IPR006297 GO:0005525
Sebi570g00014 690 SUPERFAMILY EF-G C-terminal domain-like 382 460 IPR035647 -
Sebi570g00014 690 Gene3D - 92 275 IPR027417 -
Sebi570g00014 690 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 93 274 IPR000795 GO:0003924|GO:0005525
Sebi570g00014 690 Pfam Elongation factor G C-terminus 489 575 IPR000640 -
Sebi570g00014 690 Hamap Translation factor GUF1 homolog, organellar chromatophore [lepA]. 87 687 IPR027518 -
Sebi570g00014 690 SUPERFAMILY Translation proteins 272 377 IPR009000 -
Sebi570g00014 690 FunFam Translation factor GUF1, mitochondrial 376 457 - -
Sebi570g00014 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 299 IPR027417 -
Sebi570g00014 690 SMART EFG_C_a 488 576 IPR000640 -
Sebi570g00014 690 Gene3D - 570 644 IPR038363 -
Sebi570g00014 690 SUPERFAMILY EF-G C-terminal domain-like 489 583 IPR035647 -
Sebi570g00014 690 FunFam Translation factor GUF1, mitochondrial 276 374 - -
Sebi570g00014 690 Pfam GTP-binding protein LepA C-terminus 578 684 IPR013842 -
Sebi570g00014 690 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 133 148 IPR031157 -
Sebi570g00014 690 Gene3D - 458 569 - -
Sebi570g00014 690 FunFam Translation factor GUF1, mitochondrial 570 644 - -
Sebi570g00014 690 Gene3D Translation factors 276 375 - -
Sebi570g00014 690 PRINTS GTP-binding elongation factor signature 164 174 IPR000795 GO:0003924|GO:0005525
Sebi570g00014 690 PRINTS GTP-binding elongation factor signature 180 191 IPR000795 GO:0003924|GO:0005525
Sebi570g00014 690 PRINTS GTP-binding elongation factor signature 97 110 IPR000795 GO:0003924|GO:0005525
Sebi570g00014 690 PRINTS GTP-binding elongation factor signature 140 148 IPR000795 GO:0003924|GO:0005525
Sebi570g00014 690 PRINTS GTP-binding elongation factor signature 216 225 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi570g00014 Sebi-Chr570 187622 197663 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi570g00014 95 328 Eukaryotic Initiation Factors Gene Family AT3G22980 33.603 4.20e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi570g00014 K21594 - gmx:100809693 1216.06