Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi56g00086 ATGGCTGAATCATTTGCCTTTGATGTTGCTCATTCACTGTTGGGGAAGCTTACTTCTTATGCCTATGAAGAAGCTTCTCGAGCCTATGGTGTCTATGATGATCTGCAACGGTTCAAAAACACTTTGTCAATTGTCAAAGGTGTGCTATTGGATGCTGGAGAGAAGAAGGACCAGAAGCATGGCTTGCGTGAATGGTTGAGGCAGATTCAAAATATCTGCTACGATGCTGAAGATGTCTTGGATGGATTTGAGTTCCAAAACAAGCGAAACCAAGTTGCCAAAGCTTCTGGCAGCACTAGGATGAAGGTAGGCCACTTCTTTTCTTCACATAATTCTCTTGTTTTCCGTACAATGATGGCTCATCAAATCAAAGATGTTACGGATAGATTGGATAAGGTAGTAGCTGATGGAAACAGGTTTGGTCTTGAGAGAAGAATTGATGTTGATCCTAGACTTGGTCAGAGAGATATGACTTTTTCCCACGTTGATGCTTCAAATGTGATAGGAAGGGAGAATGACAGGGAAGAAATTGTCCAGCTATTGATGCAACCTCACCCTCATGGGGATGGTGATGGTGATAAAAGTCTTTGTGTTATTCCCATAGTGGGAATTGGAGGCTTGGGGAAGACCACACTTGCAAAGCTGGTGTTCAACGATAAGAGGATGGATCAACTTTTCCAACTGAAAATTTGGCTAGTAAGTCATCTTAGATATAAACTTTCTCGTCAAAAGTTTTTACTTGTCTTAGATGATATATGGAATCATGATCGTGCCAAATGGATTGGGTTGAAAGATTTGATAAAAGACGGTGCGATAGGAAGTAAAATCTTAGTCACAACACGTAACAAGTCAATTGCTTCAATGATGGGGACGGTTGATCCATATGTTTTGATAGGTCTTTCTCCGGAGAATTGTTTTTCTCTGTTTGTCAAATGGGCATTCAAGGATGGTGAAGATAAAAACTATCCAAATCTAGTGGAGATTGGAAAAGAAATTGTCAAAAAATGTCATGGAGTTCCACTAGCTGTGAGAACCTTAGGAAGTTCCCTATTCTCAAAATTTGATTTAGAGAAATGGGAATTTACAAGAGACTCTGAACTATGGAATTTAGAACAAAAGGAAGATGGTATTCTCACTGCGCTGAAGCTAAGTTATGATCAGATGCCATCCCATTTGAGGCATTGTTTTACTTACTTTTCCCTTTTTCCCAAAGATTATGACTTTGATGGTAAGTTAATGACTAAGCTTTGGCTGGGCCATGGATTACTTCAATCCCCAGATGGAAGTCAAAAGAAAAATGATATTGTAAGAGAATATATAGATGAGTTATATTCAAGATCCTTTATTCAAGATTTTGAAGTCTTTGGCCACACTAACTACTTTTTCAAAGTGCATTATTTGGTGCATGATCTTGCAATGTATGTTGTGAAAGAGGAGTTTGTAGTGGTAAACTCCCATACTCAGAATATACTTGAGCAAGTAAGACATTTATCAATTTTGGAAACTGATTCACTTGGCCATGCTCTGTTCCCCAATTCCAGAAGTGTGAGAACTATCCTATTTCCCATTGATGGAGTGGGTCTTGACAATGAAACTATTTTGGATTCATGGCTATCAAGATACAAATACTTGCGGTATTTAGATTTAAGTGATTCTTCATTTGAGACTCTACCTAATTCAATTGCTGAATTAGAGCATCTACCATCTCTTAGTCTTGCTCTTAACCACAAAATCAAAAGACTTCCACATTCTATATGCAAGCTCCATAATTTGCAAATTTTGTCACTCGAAGGATGCATAGAGCTTGAAACATTGCCTAAAGGATTAGGGAAGCTGATTAGCCTTCGAGAATTGTATATAACCACAAAACAATCAGTTCTGCCACATAATGAATTTGCAAGCTTGACCCATCTTCAAGTGTTGGGTTTTTATCGTTGTGACAATTTGAAGATTTTGTTCAACGGGGCACAACTCGATTCCCTTGAAGATTTGTATGTTGATTCATGCAGGAGCCTAGAGTCCTTACCACTTTATATTCTCCCTCAATTACAGACTTTGTTGGTTATCAACTGTAAGAGGTTAAATCTGTCATGGAAGGCTGAAAGCCCAATCCAACAATCAATGAACCATGAAATCACAATCCAAAGATTGAGGTTGGAAATTTTGCAACTTGTGGATTTTCCAGAGCTTCAAATGTTGCCTCAATGGATTGAAGGAGCTACAGGCACTTTACAGAGCTTGATAATTTATAATTTTCCTAATCTGAAGATGCTTCCAGAGTGTCTCACAACAATGACTCATCTTAAGATACTTCGTATTGGTAACTGTCCTCAACTGTTGAGTCTTCCAAGTAACATGCATCACCTCACTGCTCATCTTGAAGAATTGTTGATATTTGGTTGTCCTGAATTGTGCCGAAAATGTCAGCCGCAATCTGGTGAGTATTGGCCCATCATTGCTCACATAAAAAAAATTGACATTGAAGAACCAAGAGAACAGGAGGAGAAATGA 2511 0.3851 MAESFAFDVAHSLLGKLTSYAYEEASRAYGVYDDLQRFKNTLSIVKGVLLDAGEKKDQKHGLREWLRQIQNICYDAEDVLDGFEFQNKRNQVAKASGSTRMKVGHFFSSHNSLVFRTMMAHQIKDVTDRLDKVVADGNRFGLERRIDVDPRLGQRDMTFSHVDASNVIGRENDREEIVQLLMQPHPHGDGDGDKSLCVIPIVGIGGLGKTTLAKLVFNDKRMDQLFQLKIWLVSHLRYKLSRQKFLLVLDDIWNHDRAKWIGLKDLIKDGAIGSKILVTTRNKSIASMMGTVDPYVLIGLSPENCFSLFVKWAFKDGEDKNYPNLVEIGKEIVKKCHGVPLAVRTLGSSLFSKFDLEKWEFTRDSELWNLEQKEDGILTALKLSYDQMPSHLRHCFTYFSLFPKDYDFDGKLMTKLWLGHGLLQSPDGSQKKNDIVREYIDELYSRSFIQDFEVFGHTNYFFKVHYLVHDLAMYVVKEEFVVVNSHTQNILEQVRHLSILETDSLGHALFPNSRSVRTILFPIDGVGLDNETILDSWLSRYKYLRYLDLSDSSFETLPNSIAELEHLPSLSLALNHKIKRLPHSICKLHNLQILSLEGCIELETLPKGLGKLISLRELYITTKQSVLPHNEFASLTHLQVLGFYRCDNLKILFNGAQLDSLEDLYVDSCRSLESLPLYILPQLQTLLVINCKRLNLSWKAESPIQQSMNHEITIQRLRLEILQLVDFPELQMLPQWIEGATGTLQSLIIYNFPNLKMLPECLTTMTHLKILRIGNCPQLLSLPSNMHHLTAHLEELLIFGCPELCRKCQPQSGEYWPIIAHIKKIDIEEPREQEEK 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi56g00086 836 PRINTS Disease resistance protein signature 198 213 - -
Sebi56g00086 836 PRINTS Disease resistance protein signature 336 350 - -
Sebi56g00086 836 PRINTS Disease resistance protein signature 586 602 - -
Sebi56g00086 836 Gene3D Ribonuclease Inhibitor 482 827 IPR032675 -
Sebi56g00086 836 Gene3D - 236 293 IPR027417 -
Sebi56g00086 836 Gene3D - 157 235 IPR027417 -
Sebi56g00086 836 Gene3D - 299 383 IPR042197 -
Sebi56g00086 836 Pfam Rx N-terminal domain 11 98 IPR041118 -
Sebi56g00086 836 CDD RX-CC_like 6 133 IPR038005 -
Sebi56g00086 836 Gene3D - 384 474 IPR036388 -
Sebi56g00086 836 Gene3D - 10 124 - -
Sebi56g00086 836 SUPERFAMILY L domain-like 463 817 - -
Sebi56g00086 836 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 398 IPR027417 -
Sebi56g00086 836 PANTHER DISEASE RESISTANCE PROTEIN RP 63 782 IPR044974 GO:0006952
Sebi56g00086 836 Pfam NB-ARC domain 235 386 IPR002182 GO:0043531
Sebi56g00086 836 Pfam NB-ARC domain 193 233 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi56g00086 Sebi-Chr56 1929929 1932571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi56g00086 199 804 WRKY Transcription Factor Family AT5G45050 21.955 2.42e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi56g00086 - - gmx:100794422 1132.09