Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi56g00081 ATGGCTTCAAGAAAAGCTGAAGAAGCTGCTTGGAGACGCTATGAAGCTACTCAGTGGCTAGAAAGCCAAGTGGGTCCTCTTGGCATATCCAACCAACCCACAGAGAGAGAACTTATTTCTTGCTTAAGAAATGGTCTAATTCTTTGCAACGCCATTAACAAGATTCATCCAGGAGCAGTGCCAAAGGTTGTGGATAATCAAGTAGCTTCACAAGCACTTACCTGGGATTCCCAGCCTTTGCCAGCCTATCAGTATTTTGAAAATGTCCGCAACTTTCTGGTTGCAGCGGAAGAATTAAAGCTTCCAGCTTTCGAAGCTTCTGATCTTGAAAGGGATAGTGTAGAAATGGGATCAGCAGCAAAAGTTGTTGATTGCATTCTATCACTTAAATTGTTTCAAGAGATGAAGCTTATGAACTATCAGAATGGATCCAACAAGCACATAAAATCTCCTTTACTTATGAACTCAAACAGTAGAATGCATTCAAGAGCCACAGCTGCATTCCCCTCTGATGCATGTAGGCACTTGGATCTGTCTACCACATTGGACAAAACACCTGTTGAGAGTAATTTCCAGAGACGAGAAGCAGAACTTGTGGAATCACTTGTCAAGCTACTGGTTGACGGATGTTTGACGCTAAAGAAAATATTGGATCCAATAAAGCTATTTAATCAGATCATGACAAGTTGTGGGGAACAACCACCTATGAAGTTCCCTGAGCTGCCATTGCTACTCAAGAATGTTATAAAAGAAAGGATTAGCTTACAACCTCATTCCACTTCCACACCCACAGAATCAGATGCTTTGTCTGCTCCTGAAAGTTCCCAGTGTTACAGAGCTTGCCCCGGAAAGTGCACTTGCAATCAAAAGAATCTCTTAGATATGCAGGAAAAAGAACTTCTGGATCTCAAGGCTTTGAAGTTGAAAATTAAGAATGAGTTTGAAGAGATGCAGTCACAGTTTCAGAGATTTTTTGATGATATTGGAAGTCAAATACAGGACATGTCAACCAAAGCCCTTGGGTATCACAGAGTGGTAGAAGAGAATAGGAAACTATACAACATGGTCCAAGATTTGAAAGATCCATCAAAACCACTAAAAGATGGAAGGAAACTTTTTCAGTTTAATAGGGTTTTTGGTCCAACAGCTGGCCAAGATGAGGTTTTTAAGGACACTCAACCATTAATTAGATCCGTGATGGATGGGTACAACGTTTGTATTTTTGCTTATGGACAAACTGGATCTGGGAAGACTTACACTATGAGCGGTCCTTCGGGTGGAACATCTAAGGATGTGGGGATCAATTATTTGGCTCTTAATGATCTGTTTCAAATGTCCAAAGAAAGAAAGGACATTATAACATATGACATTTATGTTCAAATGGTTGAGATTTACAATGAACAATTTGTCTCCTTAACTAATCTCAAATTAGAGATCCGGAGCTGCAATGATGATGGGTTGAGCCTTCCTGATGCTAATTTGCGTTCAGTAAAGTCCACAACTGATGTTATAACCCTCATGAAACTTGGTGAGGTTAATCGCGCTGTCAGTTCCACTGCGATCAACCACAGGAGTAGTCGTTCACACAGTGTACTTACTGTGCATGTTCATGGCAAAGATACATCTGGGAGCTCCATTCGTAGTTGCCTGCACTTAGTAGACCTTGCTGGAAGTGAAAGAGTAGACAAGTCTGAAGTTACAGGAGAAAGACTAAAGGAAGCACAATTTATTAACAAGTCTCTCTCCTGTTTGGGAGATGTTATCACTGCCCTGGCTCAGAAGAATTCTCACATTCCTTACAGGAACAGCAAACTCACACTTCTTTTGCAGGACTCTTTAGGTGGACATGCTAAAACATTGATGTTTGCTCATGTGAGTCCGGAAGCAGATTCCTTTGGTGAAACAGTTGAGAACCTTAAGCTTGCATTGGCAAATAAGGAAAATCTAAGAGCAGTGTTCAATAGAACTAAAGAACCTCATACTCCATCAGAGAGGCCAATGTTGGTGTCTGAGAAAACTCCATTGCGCCCTCGAAGACTTAGCATTGAGAATTGCAGCGCCGTAAAGACTGATAAACCTGCAAATCCTGAGGACATAAGTGGAATCAAATCACCTTCCTTGTTACGTCGTTCAAGGAGATTAAGCTTGGAAGGTTCAAGAACTATCAAGAAAGACAGTAGTCTACAACCAAAAGTAGCAACTGATCTAAGCAAAACTTTACAGTATGAGCCACTGTCTCAGCAGAAACATCGACCACAGCAAGATCCAGAAGCAGTGTCAAAGCTAAATGGCCAAATCAGCAATGGAAATTCCAGTGTCAAAGCTCCTCGAAGCCCTACAAACATTTCCTATAACAAGAGGTTGATAAAAGTAGATGGAGGGATCCAAATTCATCCACTTAAACTACCTCAGACACCTGAACCACCAATGCTAGATGCAAATAATGCACACAAAACTGTGCCAAGTGAGCTTGCATCTTGCACTGATTCACAGACAACAAAGGTGACAAGTAGCACAAATGGAAAAGGATCCCATATAAGAAGATCCCTGAGAACAATTGGGAAACTGATTAATGGCCCTGATAAGAGGAGCCAACAAAATGTGGTTGAAGTCAAGTCACCAATTAAGGGCACTAGCCATACCAATCAAGTAAAGTCACCACTGACAGCTGGTGAGAAGACAAGAAGGAGGCAATCTCTAACAGGGATTCAAGCATCAGGGCCAAACAACTCACGCAGGTCTTCACTTGGAGTGAAGCCAGTAGCATATGACAAGGACAGAAATGCTAGAACGCCTCCTCCTGTGCAATCTGACACCAAGACTTCAAAACGGTGGATATAG 2841 0.4171 MASRKAEEAAWRRYEATQWLESQVGPLGISNQPTERELISCLRNGLILCNAINKIHPGAVPKVVDNQVASQALTWDSQPLPAYQYFENVRNFLVAAEELKLPAFEASDLERDSVEMGSAAKVVDCILSLKLFQEMKLMNYQNGSNKHIKSPLLMNSNSRMHSRATAAFPSDACRHLDLSTTLDKTPVESNFQRREAELVESLVKLLVDGCLTLKKILDPIKLFNQIMTSCGEQPPMKFPELPLLLKNVIKERISLQPHSTSTPTESDALSAPESSQCYRACPGKCTCNQKNLLDMQEKELLDLKALKLKIKNEFEEMQSQFQRFFDDIGSQIQDMSTKALGYHRVVEENRKLYNMVQDLKDPSKPLKDGRKLFQFNRVFGPTAGQDEVFKDTQPLIRSVMDGYNVCIFAYGQTGSGKTYTMSGPSGGTSKDVGINYLALNDLFQMSKERKDIITYDIYVQMVEIYNEQFVSLTNLKLEIRSCNDDGLSLPDANLRSVKSTTDVITLMKLGEVNRAVSSTAINHRSSRSHSVLTVHVHGKDTSGSSIRSCLHLVDLAGSERVDKSEVTGERLKEAQFINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETVENLKLALANKENLRAVFNRTKEPHTPSERPMLVSEKTPLRPRRLSIENCSAVKTDKPANPEDISGIKSPSLLRRSRRLSLEGSRTIKKDSSLQPKVATDLSKTLQYEPLSQQKHRPQQDPEAVSKLNGQISNGNSSVKAPRSPTNISYNKRLIKVDGGIQIHPLKLPQTPEPPMLDANNAHKTVPSELASCTDSQTTKVTSSTNGKGSHIRRSLRTIGKLINGPDKRSQQNVVEVKSPIKGTSHTNQVKSPLTAGEKTRRRQSLTGIQASGPNNSRRSSLGVKPVAYDKDRNARTPPPVQSDTKTSKRWI 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi56g00081 946 ProSiteProfiles Kinesin motor domain profile. 342 648 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi56g00081 946 SMART kinesin_4 217 655 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi56g00081 946 MobiDBLite consensus disorder prediction 824 847 - -
Sebi56g00081 946 Coils Coil 293 320 - -
Sebi56g00081 946 MobiDBLite consensus disorder prediction 872 946 - -
Sebi56g00081 946 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 359 646 - -
Sebi56g00081 946 SUPERFAMILY Calponin-homology domain, CH-domain 9 141 IPR036872 -
Sebi56g00081 946 Gene3D Kinesin motor domain 335 667 IPR036961 -
Sebi56g00081 946 SMART ch_5 12 132 IPR001715 GO:0005515
Sebi56g00081 946 ProSiteProfiles Calponin homology (CH) domain profile. 10 134 IPR001715 GO:0005515
Sebi56g00081 946 MobiDBLite consensus disorder prediction 680 712 - -
Sebi56g00081 946 MobiDBLite consensus disorder prediction 932 946 - -
Sebi56g00081 946 Pfam Calponin homology (CH) domain 12 131 IPR001715 GO:0005515
Sebi56g00081 946 MobiDBLite consensus disorder prediction 824 846 - -
Sebi56g00081 946 FunFam Kinesin-like protein KIN-14L 1 161 - -
Sebi56g00081 946 Pfam Kinesin motor domain 362 643 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi56g00081 946 CDD CH_AtKIN14-like 12 131 - -
Sebi56g00081 946 PRINTS Kinesin heavy chain signature 402 423 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi56g00081 946 PRINTS Kinesin heavy chain signature 549 567 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi56g00081 946 PRINTS Kinesin heavy chain signature 519 536 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi56g00081 946 PRINTS Kinesin heavy chain signature 598 619 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi56g00081 946 MobiDBLite consensus disorder prediction 872 916 - -
Sebi56g00081 946 Gene3D - 3 135 IPR036872 -
Sebi56g00081 946 PANTHER KINESIN-LIKE PROTEIN KLP-3 363 866 IPR027640 GO:0003777|GO:0007018
Sebi56g00081 946 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 364 648 IPR027417 -
Sebi56g00081 946 MobiDBLite consensus disorder prediction 741 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi56g00081 Sebi-Chr56 1842525 1850643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi56g00081 292 642 Calmodulin-binding Proteins AT5G65930 39.071 1.92e-61 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi56g00081 K10406 - gmx:100812493 1355.5