Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi568g00011 ATGGCCCCAAAAACTAGAAGCTCTACCGTTCAAGTAGTTCTTATAGTAGCTTTTTTCATTGTCAATGTTGTTTTATCTGATGATACTGTATCAATTCCTGCTGACAAGCTCCAATTGAGCGCTTGGTTCAATAACAATGTGGCACCCTTAGCTCAAAGAAAGAGTAGTTTGGACCCAGCACTAGTGGCTGCAGAGGAAGGTGCAAAGGTTGTGAAGGTCATGCAAGATGGCAGTGGGGATTTCAAAACCATCACTGAGGCCATTAATAGCATACCTAATGGGAACAATAAGCGTGTGATTGTGTATATTGGTGGTGCAAATTATAATGAGAAAATCAAAATTGAAAGGACAAAACCTTTTGTCACTTTATATGGGGCACCGGAGAACATGCCAAACTTGACATATGGGGGCACTGCAAGACAATATGGCACTGTTGACAGTGCTACTTTGATTGTTGAATCAGATTACTTCATGGCTGCTAACATCATAATCTCGAATTCTGCACCAAGACCTGATGGAAAAAGTCAAGGAGCTCAAGCAGTTGCATTGAGAATTTCTGGTGACAAAGCAGCATTTTATAATTGCAAACTATTAGGATTCCAAGATACTTTGTGTGATGATAGGAATAGGCATTTTTTCAAAAACTGCCTAATTCAAGGCACAGTGGATTTTATTTTTGGAAGTGGGAAGTCGCTATATTTGGATACTAAATTGAGAGTACTTGGTGACAATGGGATGAGTGTAATAGTGGCACAAGCAAGAAAAAGTGAGACAGAGGATAATGTCTATTCATTTGTGCATTGCAATATTACTGGAACAGGAACTGGCACTTTCTTGGGTAGAGCATGGATGTCTCATTCCAAAGTGATCTTTTCTTACACCACTATGAGCACTATCGTTAATCCAGCAGGGTGGAGTAACAATAGACACCCTGAATATGATAGGTAA 948 0.3977 MAPKTRSSTVQVVLIVAFFIVNVVLSDDTVSIPADKLQLSAWFNNNVAPLAQRKSSLDPALVAAEEGAKVVKVMQDGSGDFKTITEAINSIPNGNNKRVIVYIGGANYNEKIKIERTKPFVTLYGAPENMPNLTYGGTARQYGTVDSATLIVESDYFMAANIIISNSAPRPDGKSQGAQAVALRISGDKAAFYNCKLLGFQDTLCDDRNRHFFKNCLIQGTVDFIFGSGKSLYLDTKLRVLGDNGMSVIVAQARKSETEDNVYSFVHCNITGTGTGTFLGRAWMSHSKVIFSYTTMSTIVNPAGWSNNRHPEYDR 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi568g00011 315 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 63 312 - -
Sebi568g00011 315 Pfam Pectinesterase 71 307 IPR000070 GO:0030599|GO:0042545
Sebi568g00011 315 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
Sebi568g00011 315 Gene3D - 28 314 IPR012334 -
Sebi568g00011 315 SUPERFAMILY Pectin lyase-like 68 309 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi568g00011 Sebi-Chr568 215390 216574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi568g00011 8 315 Carbohydrate Esterase AT1G69940 56.634 1.67e-132 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi568g00011 K01051 - gmx:100786427 512.301