Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi566g00020 ATGGCAGGTGAAGAGCATCATTCATTTGAAAATTATAGTGGTGGTGAACTTGAAAAAAAGAAGATTGATGAGATACATGATACTATTCCAAATGATCTTATACCAAGAGATGAGATAGAATTTGAGACAGAAAATGCAGCCTATAATTTTTACAATTCTTATGCTTACAGAGTGGGTTTTAGTGTAAGGATCAGTAAAGGACACAAAGGTCATGATGGAAAGATGATTGATAGAGTGTTTTGTTGTTCATGTGAAGGTTATCGTGGGAAAGATAAACGAGAAGCTAATACCAAGAATCCTCGTGCACAGACAAGATTTGGTTGCTTGGCTAAGATGAAAGTTAATAGTCGTTCAACCGGGAAGTATCGTGTTACCGCATTTGCTGCTGAACATACACATGAGACTACAACTCCGAGCAAGAGTCATTTGCTTAGATCTCAAAGGAAAATAACTACTTCTCAAGCATCTGAGGTTAATTTAGCTGAGATTTCTGGAATTACTCCAAAAGCAAGTTGTGAGTTAATGGCCAGGAGAGTTGGTGGTCGTGAGAATCTAGAATTCATTCCAGAAGACTAG 576 0.3767 MAGEEHHSFENYSGGELEKKKIDEIHDTIPNDLIPRDEIEFETENAAYNFYNSYAYRVGFSVRISKGHKGHDGKMIDRVFCCSCEGYRGKDKREANTKNPRAQTRFGCLAKMKVNSRSTGKYRVTAFAAEHTHETTTPSKSHLLRSQRKITTSQASEVNLAEISGITPKASCELMARRVGGRENLEFIPED 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi566g00020 191 Pfam FAR1 DNA-binding domain 49 135 IPR004330 -
Sebi566g00020 191 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 23 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi566g00020 Sebi-Chr566 607582 608157 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi566g00020 FAR1 6.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi566g00020 K17604 - ccaj:109817905 286.189