Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi566g00014 ATGAAAGAGGGTGGTAGGAAACAGGGTGCACCCTCACCCTGTGCTGCATGCAAGCTTCTCCGCAGAAGGTGTGCTCAAGATTGTGTTTTTGCTCCTTATTTCCCAGCTGATGAGCCCCAGAAGTTTGCAAATGTGCACAAAGTGTTTGGTGCTAGCAATGTCAACAAGATGCTTCAGGACTTACCAGAGCATCAAAGAGGGGATGCAGTGAGCAGCATGGTGTATGAGGCAAATGCAAGGGTGAGAGACCCTGTGTATGGGTGTGTAGGGGCCATTTCATCACTTCAGCAACAGATTGATGTGTTACAGACCCAATTGGCAGTGGCCCAGGCTGAGGCAGTGCACCTTAGGGTGCGCCAAACTGCATCACTCTGGAACCAAGGTCATAGCCCCACTAGCCCAACCTATAGTGGCTCACCATCATCCAAGATCATTGAATCACAAGCCAAGCCTATTTTTGACATGGACATGGTGGTGGACCACACTGGCTATGTTTACAAGGAAGATGCACCTGTTGGCATTTACTTAGTTTTTACATAA 540 0.487 MKEGGRKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAVAQAEAVHLRVRQTASLWNQGHSPTSPTYSGSPSSKIIESQAKPIFDMDMVVDHTGYVYKEDAPVGIYLVFT 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi566g00014 179 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 126 - -
Sebi566g00014 179 Coils Coil 92 112 - -
Sebi566g00014 179 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Sebi566g00014 179 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi566g00014 Sebi-Chr566 251613 257747 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi566g00014 1 128 AS2 family AT1G31320 86.719 6.89e-73 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sebi566g00014 LOB 7.4e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi566g00014 - - gmx:100306560 280.411