Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi565g00002 ATGGCTTCTTCAATTCGTCCTTCACCCTCTTCATTCATGTTACCCTCTCTCTCTTCCTGCAACCCTTCTCAAAGGCTCTCTCTTTTTCATCTTGGTAGCGGTGTTAGACAGTACCATAATTTTGGTCTGAAAGCATCCAGATTATTGAGACATGATGGTAGCTGCATGAAAGTGATGGCATCTGGGAACATGTCCCCAGTTGCTACCCAAGAAAGTGTACTAGATTGGGTCAAACAGGACAAATTTTATACAGAGTGCCTGGGAATGAAGGTGCTCAGAAAGCGTGACATGCCAGAGGAGAGATATACCAATGCCTTTCTTGGATATGGACCTGAGGATGCACACTTTGTTATTGAACTGACATACAATTATGGGATTGACAAGTATGACATTGGAACTGGATTTGGCCATTTTGGTATTGCTATTGATGATATTTCAAGAATAGTGGAAATTGTAAGAGCTAAGGGTGGAAAAATAATTAGAGAGCCTGCTCCTGTCAAGGGAGGCAGCTCAACAATTGCAGTTATTGAAGATCCTGATGGTTATGAATTTGAACTTTTGGAAAGGGCTCCCTCTCCTGAGCCTTTGTGTCAAGTAATGCTTCGGGTGGGTGATCTTGATCGTTCCATAAAATTTTATGAGAAGGCTCTTGGTATGCAGCTACTTCGTACACGAGATAATCCAGAATCCAAGTATACCATTGCAATGCTGGGTTATGGTCCAGAAGAAAAAAGTACTGTTCTGGAGTTGACTTACAACTATGGAGTCACAGAATATGATAAAGGAGATGCATATGCTCAGATTGCAATAGGCACAGATGATGTGTACAAAACTGCAGAAGCAATTAAACTTGCTGGAGGAAAGATTACTCGGGAACCAGGACCAGTACCTGGTATCAAAACAAAAATAACATCATGCGTGGATCCTGATGGTTGGAAAACGGTTTTTGTAGATAATGTTGATTTTCTTAGGGAGTTGGAGTAG 984 0.4146 MASSIRPSPSSFMLPSLSSCNPSQRLSLFHLGSGVRQYHNFGLKASRLLRHDGSCMKVMASGNMSPVATQESVLDWVKQDKFYTECLGMKVLRKRDMPEERYTNAFLGYGPEDAHFVIELTYNYGIDKYDIGTGFGHFGIAIDDISRIVEIVRAKGGKIIREPAPVKGGSSTIAVIEDPDGYEFELLERAPSPEPLCQVMLRVGDLDRSIKFYEKALGMQLLRTRDNPESKYTIAMLGYGPEEKSTVLELTYNYGVTEYDKGDAYAQIAIGTDDVYKTAEAIKLAGGKITREPGPVPGIKTKITSCVDPDGWKTVFVDNVDFLRELE 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi565g00002 327 CDD GlxI_Ni 196 317 - -
Sebi565g00002 327 PANTHER LACTOYLGLUTATHIONE LYASE 76 327 - -
Sebi565g00002 327 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 79 191 IPR029068 -
Sebi565g00002 327 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Sebi565g00002 327 Gene3D - 192 327 IPR029068 -
Sebi565g00002 327 Gene3D - 71 191 IPR029068 -
Sebi565g00002 327 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 195 319 IPR037523 -
Sebi565g00002 327 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 196 319 IPR029068 -
Sebi565g00002 327 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 65 189 IPR037523 -
Sebi565g00002 327 ProSitePatterns Glyoxalase I signature 1. 198 219 IPR018146 GO:0004462|GO:0046872
Sebi565g00002 327 ProSitePatterns Glyoxalase I signature 2. 132 144 IPR018146 GO:0004462|GO:0046872
Sebi565g00002 327 NCBIfam lactoylglutathione lyase 75 190 IPR004361 GO:0004462|GO:0046872
Sebi565g00002 327 FunFam Lactoylglutathione lyase 192 327 - -
Sebi565g00002 327 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 198 313 IPR004360 -
Sebi565g00002 327 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 81 186 IPR004360 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi565g00002 Sebi-Chr565 13848 17085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi565g00002 198 316 Calmodulin-binding Proteins AT1G08110 28.276 2.07e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi565g00002 K01759 - gmx:100781439 561.992