Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi564g00016 ATGTCACTAGGTATGGCTGCTGGAATTGGCGCCAACTTCCCAGGTCTGCAGAGGTGTGGGAAAAGTTGCAGATTGAGGTGGATGAATTATCTAAGGCCAAATATCAAAAGAGGGAACTTCACTCAACAAGAAGAGGAATGTATCATCAGAATGCACAAAAAACTGGGCAATAGATGGTCTGCCATTGCGGCTGAATTACCTGGAAGAACAGATAATGAAGTAAAGAATCATTGGCATACCACACTCAAGAAGAGAGTTGCAAATGAGAAAGCCAACAAATCCTCCAAATCAAAAGCTATTGAATCCACTCAAGGGAGGGACTCAGTGACCAACAATGATGCTGTTCCTGTTTTTCAAGTTACTCTTCCAACTACTTCCCATATGTCAGAAATCACTGGTCCACTATCCCCATTTTCATCCTCCAGCGAGTTCTCTTCCGTAACTTCAGATCACACTTCTGCTGCCGGTAATGGAAATTTGTTGCTTGAAGATGATGACTTCAGTTTTCTGGATGCATATGCAGAGACTATGAATGGAAGTTTCTGGACAGAGTCATTATTAATGGCTGATATTTCATCCACTACACCAAGTGAAATAGTACCAGGGGATCTTACTTGTGCTATTCCAAATCCAGATACTGCTCAGATCTTTGATCCTTGTGTATTGTCTCCCAATCAATCGTCCAGTGAAAGCTTGGTTTTGGAGAATGACTTTGGCAACTTTCTGGATGCATGCACAGAACAGACAATTGATAAATTTTGGGGACAGCAATATGTGGCTGACATGTCCCACTCTCCAAGCGAACTGTTGTCACCATTGCCAACTGAATTTGATTATTGTTCTACGATATATGATGCAGACCTTTGGAGTCAAAGTAATTTGTATGATGGAAATCTTAGCTTATTCTAA 909 0.4125 MSLGMAAGIGANFPGLQRCGKSCRLRWMNYLRPNIKRGNFTQQEEECIIRMHKKLGNRWSAIAAELPGRTDNEVKNHWHTTLKKRVANEKANKSSKSKAIESTQGRDSVTNNDAVPVFQVTLPTTSHMSEITGPLSPFSSSSEFSSVTSDHTSAAGNGNLLLEDDDFSFLDAYAETMNGSFWTESLLMADISSTTPSEIVPGDLTCAIPNPDTAQIFDPCVLSPNQSSSESLVLENDFGNFLDACTEQTIDKFWGQQYVADMSHSPSELLSPLPTEFDYCSTIYDADLWSQSNLYDGNLSLF 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi564g00016 302 Pfam Myb-like DNA-binding domain 37 81 IPR001005 -
Sebi564g00016 302 CDD SANT 39 82 IPR001005 -
Sebi564g00016 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 86 IPR017930 -
Sebi564g00016 302 SMART sant 36 84 IPR001005 -
Sebi564g00016 302 Gene3D - 7 36 - -
Sebi564g00016 302 MobiDBLite consensus disorder prediction 87 110 - -
Sebi564g00016 302 Gene3D - 38 111 - -
Sebi564g00016 302 ProSiteProfiles Myb-like domain profile. 32 82 IPR001005 -
Sebi564g00016 302 SUPERFAMILY Homeodomain-like 17 89 IPR009057 -
Sebi564g00016 302 PANTHER MYB DOMAIN PROTEIN 55 15 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi564g00016 Sebi-Chr564 568004 569207 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi564g00016 15 186 MYB Transcription Factor Family AT2G31180 45.349 2.03e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi564g00016 Myb_DNA-binding 1.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi564g00016 K09422 - gmx:100777107 290.041