Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi564g00009 ATGGAGTTTGACCTTGAAAACCCTTTAGAAAACTTCCATGACCTTGACTGTGATGCTGTCTCTTCCCTCTTCCTCATTGAATCTGACCACATCCCACCACAAAATTACTTTCAAACCCTCAAAGCCAGAGATCTTGACATCTCTGCCAGAAGAGAAGTCATTTCTTTAATCTCACAGTTGTCTTGCACTTTGGATCCAGTTTTGTCTTACCTTGCTATCAACTATCTGGACCGGTTCCTGGCCAACCAAGGGTTATTGCAACCAAAGCCATGGGTCTTAAGGCTTCTTGCAGTCTCCTGCTTTTCTCTAGCTGCCAAGATGATGAGAACAGAGTACTCTGCCACAAATGTTCAGGCCCTTTTGGAACAAAGTAAAGGTGGCATCATCTTTGAGGCACAAACAATACAAAGAATGGAGGCACTTATCTTGGGAGCTCTACAATGGAGAATGCGATCAATCACCCCCTTCTCTTTCTTAACTTTCTTCATTAATTTGTTCAGTCTCAAAGACCCACACACGGGAAAGGTTCTGAAAAATCGAGCGTCTGAAATCATATTATTCAAGTCACAAAGAGAGATAAAGCTTTGGGAATTCAAGCCATCTATAATTGCTGCATCGGCACTTCTGTGTGCTTCTCACGAGTTGTTTCCTTTTCAATATCCGTGCTTCTTAAGAGCATTATCCGATTGTTCATACGAAAACATGCTGCAATGCTATAATGTGATACAGGATATAGCTATAGAGGAGCAGAATGAGTCTGTGTTGAATGCAGTTTCAAGTTCAGACACACCGGTTAATGTGTTGGACCATCATTTTCTGAGTTCAGAAAGTGAAATAACCAACGGGATCACCGTTGATGCTTCTTCTCCTCAGAGACAAGAGAAGTATATCAAAAGAAGGAAAATCACCGGATGCGGTAACAATCCAACGAACCAGAATTCTCGGATTAAACCATGCTGA 960 0.4188 MEFDLENPLENFHDLDCDAVSSLFLIESDHIPPQNYFQTLKARDLDISARREVISLISQLSCTLDPVLSYLAINYLDRFLANQGLLQPKPWVLRLLAVSCFSLAAKMMRTEYSATNVQALLEQSKGGIIFEAQTIQRMEALILGALQWRMRSITPFSFLTFFINLFSLKDPHTGKVLKNRASEIILFKSQREIKLWEFKPSIIAASALLCASHELFPFQYPCFLRALSDCSYENMLQCYNVIQDIAIEEQNESVLNAVSSSDTPVNVLDHHFLSSESEITNGITVDASSPQRQEKYIKRRKITGCGNNPTNQNSRIKPC 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi564g00009 319 Pfam Cyclin, N-terminal domain 25 150 IPR006671 -
Sebi564g00009 319 PANTHER CYCLINS 31 250 IPR039361 -
Sebi564g00009 319 FunFam D6-type cyclin 33 147 - -
Sebi564g00009 319 FunFam D6-type cyclin 148 240 - -
Sebi564g00009 319 SUPERFAMILY Cyclin-like 135 247 IPR036915 -
Sebi564g00009 319 CDD CYCLIN_AtCycD-like_rpt2 153 242 - -
Sebi564g00009 319 SMART cyclin_7 51 144 IPR013763 -
Sebi564g00009 319 SUPERFAMILY Cyclin-like 11 150 IPR036915 -
Sebi564g00009 319 Pfam Cyclin, C-terminal domain 153 257 IPR004367 -
Sebi564g00009 319 Gene3D - 33 151 - -
Sebi564g00009 319 SMART Cyclin_C_2 153 264 IPR004367 -
Sebi564g00009 319 Gene3D - 22 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi564g00009 Sebi-Chr564 334695 336335 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi564g00009 1 300 Core Cell Cycle Gene Families AT4G03270 45.912 1.58e-75 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi564g00009 K18812 - gmx:100820404 461.455