Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi563g00035 ATGGATGCTGTTTCGAAGGGTAATAATGCAGGAGATGCGGAAAATATATCCGTGCAGGCTTTGGATGACATGTCTAATTATGGGGATAATGATGAAGCAAATTATGAGAATGAAAGTGACGAAAGTGAATCCGGAGAAGAATATTCAAGCACAGATGAAGACGAAGCAAGTGCAGGGAATGGTGATGATGGTATGACTATTGATGGCATACATGACTTTCCCAATGTTAATTGGAAAAGTCTTAGCTTGGAGGAGTTTATGAAATATCATTTTGTGGATCGTGAGGTTGCTTTTATGTTCTATAATTGGTTTGCAAGAAGGAGGGGGTTTTCTGCGCGAAAGTGCAACGTTGGAAAGACAAAGAATGAAGTAGTTGTGCGACAAACTTTTGTTTGCTTTAGAAATGGAACTAATAAGGGCAAGAAGGAAGGTTATAAAAGGGAACCTAAACGAATTGTAAGATGCGAATGTAAAGCCCGTTGCAGGGTTCGTTGCAATGCAGAAAATAGTCGTTGGTATGTGACTGCATTAGTTGATGAGCATAACCATCCGATGTTGGAAGAGAGGTTCCATGGCATGCTTCCGTCTCATAGGAGAATGGACGAGGACGAAATACAGATGATGAATCATTTGAGAGATGTTGGGATTAGCGCACCTAGCATTTATCAGGCTTTTTCTAGTCAGTCCGGTGGGTTTGAGAATGTTGGCTTTAGAACACGTGATATGTATAATGAGATAGGAAAGCAAAGGAGGTTGAAAAAAAAAATGATGCTAATGAGGCGGTGGCATTCCTTGAAGGGCTTGTTAAGGCTTTGTGCATGGCATTTGATGCGTAATGCTACCAGCAATATAGGTAAAGAAGGGCTCACCTCAGAGTTCAGTAGATGTATGTTGGGTGATTATGAAGTTGGTGAATTCAAAAATAAGTGGGAGAAGATGATTCACAAGTTTGGGGTAGAGGACCACAAATGGGTTATTGAAATGTATGAGAAAAGAAGTATGTGGGCAACAACTTACATTAGGGGGAAGTTTTTTGCTGGCCTTAGGACTACCTCGCGTTGTGAAGGATTTCATTCACAACTGAAAAAGTTTGTTAGTTATAAAAATAATTTGACTGAATTCATCCATCACTTGAATCGTTGTATAAAGTACGTTAGGCAAAAGGAAATTGAGGCTGGCTTTGCTTGTGTTAATAGTGAGCAGATTCTTCAGACTTGTTTTCAGGAGCTTGAGAAATCCGCATCTATGTTATATACCCGCAATGTGTTCATTATCTTTGGGCGGATTTTAACAAAGGCTTCCAATTTGAAGGTAGTTGGTTCAAAGCAGTGCCTTTCATCTACAATTTACTCAGTGCGTAAGCACATTTTAGCTGATGAAGAGTGGCTTGTCATGTTTGATCCAAGAAGTTGTGATTTGAAATGTTCATGTAGAAGGATGGAGTCTTACGGAATTCCATGTGATCACATAGTGGCTGTTATGGTGTATTTAGACATCAAAGAGTTGCCTATTGTTGGAAGTCTGTCCCGTTTTGGTTTTCATGACACAATTAATAAGGTTATGAAACAGACAAAGTTTATTAAGGCAAGGAACAAGAGTGGTGGCATTTCTGATATTGAGGGTGATGGTGATAATCGTACACTGAGGGACCCCATCTGTGCCAGGACAAAGGGGTGTAGTGTAAGGACAACAACTTCTGTTGGCAAAAGAAAGGAGAAGCGTCGATGCACCACTTGCAAGCGAGAAGGACACAATCGAACCACTTGCCCAGTAAAGAAGCGCATAGATCATATTGCATCGGACAGTAGAAAAAGTTCAGTTGCATGTCATGAAGTTGAAATGGCAGATTGTAATTCTGAGGATGAATCCATGGAATATGCAGCAAGTGAGAGTGAATAA 1899 0.4028 MDAVSKGNNAGDAENISVQALDDMSNYGDNDEANYENESDESESGEEYSSTDEDEASAGNGDDGMTIDGIHDFPNVNWKSLSLEEFMKYHFVDREVAFMFYNWFARRRGFSARKCNVGKTKNEVVVRQTFVCFRNGTNKGKKEGYKREPKRIVRCECKARCRVRCNAENSRWYVTALVDEHNHPMLEERFHGMLPSHRRMDEDEIQMMNHLRDVGISAPSIYQAFSSQSGGFENVGFRTRDMYNEIGKQRRLKKKMMLMRRWHSLKGLLRLCAWHLMRNATSNIGKEGLTSEFSRCMLGDYEVGEFKNKWEKMIHKFGVEDHKWVIEMYEKRSMWATTYIRGKFFAGLRTTSRCEGFHSQLKKFVSYKNNLTEFIHHLNRCIKYVRQKEIEAGFACVNSEQILQTCFQELEKSASMLYTRNVFIIFGRILTKASNLKVVGSKQCLSSTIYSVRKHILADEEWLVMFDPRSCDLKCSCRRMESYGIPCDHIVAVMVYLDIKELPIVGSLSRFGFHDTINKVMKQTKFIKARNKSGGISDIEGDGDNRTLRDPICARTKGCSVRTTTSVGKRKEKRRCTTCKREGHNRTTCPVKKRIDHIASDSRKSSVACHEVEMADCNSEDESMEYAASESE 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi563g00035 632 MobiDBLite consensus disorder prediction 33 59 - -
Sebi563g00035 632 Pfam SWIM zinc finger 469 495 IPR007527 GO:0008270
Sebi563g00035 632 Pfam FAR1 DNA-binding domain 100 186 IPR004330 -
Sebi563g00035 632 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 84 502 IPR031052 GO:0006355
Sebi563g00035 632 MobiDBLite consensus disorder prediction 1 66 - -
Sebi563g00035 632 MobiDBLite consensus disorder prediction 10 24 - -
Sebi563g00035 632 ProSiteProfiles Zinc finger SWIM-type profile. 462 498 IPR007527 GO:0008270
Sebi563g00035 632 SMART 26again6 473 500 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi563g00035 Sebi-Chr563 676570 679331 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi563g00035 FAR1 1.3e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi563g00035 - - ccaj:109791041 294.278