Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sebi563g00015 | ATGGAGGATTATCATGTTGCCAAGTTTGTGCAGATACAGGAGAAAGAATTGGGTTTATTTGCTATTTATGATGGTCATTTGGGTGACCGTGTACCTGCCTACTTACAGAAACATTTGTTTACCAACATTCTAAGGGAGGAGGAATTTTGGAATGACCCCACTCTTTCTATCTCAAAAGCATATGAGAGCACAGATCAAGCAATTCTGTCACACAGTTCTGATTTGGGGCATGGTGGATCAACAGCAGTAACTGCAATATTGATCAATGGGCGAAGGTTATGGATAGCAAATGTTGGAGACTCACGAGCTGTTCTTTCAAGAAAAGGTCAAGCAGTACAAATGACTACAGATCATGAACCAAGCACAGAACGAGGCAGCATTGAGAATAGAGGTGGTTTTGTCTCCAACTTACCAGGTGATGTGCCTAGAGTAAATGGACAACTTGCGGTTTCTCGTGCATTTGGAGACAAGAGTCTCAAGTCACATTTGAGATCAGACCCTGATGTTCAGCATGCTGACATAGATGCTGATATTGATATTCTAATCCTTGCAAGTGATGGACTCTGGAAGGTAATGGCTAATCAAGAGGCAGTGGATATTGCTAGAAGAATGAGAGACCCACAGAAAGCAGCTAAGCAGCTAACAGCTGAAGCATTAAAAAGAGACAGTAAAGATGATATATCTTGTGTTGTGGTTAAATTCAGGTGA | 708 | 0.4153 | MEDYHVAKFVQIQEKELGLFAIYDGHLGDRVPAYLQKHLFTNILREEEFWNDPTLSISKAYESTDQAILSHSSDLGHGGSTAVTAILINGRRLWIANVGDSRAVLSRKGQAVQMTTDHEPSTERGSIENRGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQHADIDADIDILILASDGLWKVMANQEAVDIARRMRDPQKAAKQLTAEALKRDSKDDISCVVVKFR | 235 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sebi563g00015 | 235 | MobiDBLite | consensus disorder prediction | 109 | 130 | - | - | |
| Sebi563g00015 | 235 | Gene3D | - | 1 | 235 | IPR036457 | - | |
| Sebi563g00015 | 235 | SMART | PP2C_SIG_2 | 4 | 234 | IPR001932 | - | |
| Sebi563g00015 | 235 | CDD | PP2Cc | 1 | 234 | IPR001932 | - | |
| Sebi563g00015 | 235 | SUPERFAMILY | PP2C-like | 1 | 234 | IPR036457 | - | |
| Sebi563g00015 | 235 | FunFam | Probable protein phosphatase 2C 39 | 1 | 235 | - | - | |
| Sebi563g00015 | 235 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 234 | IPR001932 | - | |
| Sebi563g00015 | 235 | PANTHER | PROTEIN PHOSPHATASE | 1 | 234 | IPR015655 | GO:0004722|GO:0006470 | |
| Sebi563g00015 | 235 | SMART | PP2C_4 | 1 | 232 | IPR001932 | - | |
| Sebi563g00015 | 235 | Pfam | Protein phosphatase 2C | 1 | 227 | IPR001932 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sebi563g00015 | Sebi-Chr563 | 342783 | 344128 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sebi563g00015 | 1 | 235 | PP2C-type Phosphatase Gene Family | AT1G22280 | 75.519 | 6.34e-137 | 384 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sebi563g00015 | K17506 | - | gmx:100797292 | 418.698 |