Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi562g00031 ATGAAAGGAGGAGCTAACAAGGCTTGTGCAGCCTGTAAATACCAAAGAAGAAGATGCTCAAAGGATTGTCCTCTAGCTCCATATTTCCCTGCAGATAAACCCAAAACGTTTAGCAATGCTCATCGTTTATTCGGCGTGGCAAATATAATCAGAATCATGAATCAAGTTGCGCATGATGAGAAAGATGAAGCGATGAAGTCAATTATATTTGAGTCTGATATTCGTGCAAAATATCCACAACACGGTTGTTATGGAGTTATTATGCAGTATCAAGATATGATATGCAAAGCAGCTGAAGAGTTACAATATGTACAATCATTGCTTACTCTTTATAAGGAAAGTAATTATCAAATGCAACATCATCATCTTATGCATGCAAATCAAACATATTTATTGTCTCCTACAATATATAATAATGTTAGTGCTAGTATCATAGATTCAAAGCCTGATTTGACTTCAATGCAAAGATTATCATCAGTACATGGAGAATTGAACATTCCTACTACAAATGCAAGGTCAGTACTCGACATTCCTTTTATAGATGCAAGATCTGAAGAATTGAATGTTGAGATGACTAGTGATGCTATAAATGAAAAATCTAATTTGATGTTGCTATCATGTCATGAAAAAGAGGACAATATTCCTAGTAATACTAATGCAAGATCAGTGGAAATTCCTATAAATGATGCTGCAACTGCTAATGCAAGATTTAATATGAGCTTAATGTCATCTAATGATCATGAAGAGCATGATGCTTCTGCGAGCTGTTTGATCACAAGTTTTAACACAAACGATGATGTTGACACAAAATATGCAAAAATTGATTTAAAGAAATCACAAGAACCGCCGACTTGGAATGAATTAGACATGTTTCAACATGTCAATGAGTTTGTCAACGGAAGCAAGAGTGTATGTGAATCCAGTGTGGAATCTGAATCATGGAACCGAGAACATATTCAAGGTCTTCATAATAATAATGATTACCTATTTGTCAGACATGCGAGAGCGTGA 1011 0.3492 MKGGANKACAACKYQRRRCSKDCPLAPYFPADKPKTFSNAHRLFGVANIIRIMNQVAHDEKDEAMKSIIFESDIRAKYPQHGCYGVIMQYQDMICKAAEELQYVQSLLTLYKESNYQMQHHHLMHANQTYLLSPTIYNNVSASIIDSKPDLTSMQRLSSVHGELNIPTTNARSVLDIPFIDARSEELNVEMTSDAINEKSNLMLLSCHEKEDNIPSNTNARSVEIPINDAATANARFNMSLMSSNDHEEHDASASCLITSFNTNDDVDTKYAKIDLKKSQEPPTWNELDMFQHVNEFVNGSKSVCESSVESESWNREHIQGLHNNNDYLFVRHARA 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi562g00031 336 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Sebi562g00031 336 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 129 - -
Sebi562g00031 336 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi562g00031 Sebi-Chr562 625164 626339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi562g00031 1 112 AS2 family AT3G47870 59.821 7.01e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sebi562g00031 LOB 2.8e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi562g00031 - - lang:109346924 170.244