Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi561g00020 ATGAGTGAGATGGACTTTAATAGTGATGATTCAGTTGTTAATCTGGATGATGATAGGGACTTAAGTTATAGTGACTCTTCTAGCAGTCATGAAATGAGTAGTGGAAACGATATACATAGTAATGAGGAAAATGTGTTTATTCAAGCAGAGGCTGATATGGATGAGGAGAATGATGTTATGGATACAAATGTTAGAGAGGATGTGTCAAGGAGGATAATTGACTTGACAAATGATGATATATGGGCTTTGGAGTTCGCTAGTGAAGACCATGCATTCAATTTTTACCTTTCTTATGCAAAATGTCATGGATTTGCTATGAGGAAGGATGATGTACTTCGAGACAGTAAAGGGATGGTCATAATGCGGCAGTATTTATGTAGTAGGGCTGGTATGAGGGACAAAAAGCATTTGATTATGTTAGATCGGAAAAAGGAACACAAACCTCTTACCCGTACCAATTTTCAAGCTAAGTTGAAAGTTAGGTTTGATTACAAGACGGGTAAATGGAAGGTTGTTTCATTTGAAGAATCTCATAACCATGATTTAACCCCTGCAATGTTTGTACCTATAATTCGTAATTATCGGGGATTGACTGATAGAGACAAAGCCCAAGTGGATGCATTACATTCTCATGGCATTAGACCTTTCCAGATTATGGGTTTTCTTGTTGATCAAAAAGGAGGGTATAGAAATGTTGGATTTTCAAAGAAAGATTTGTACAACTACATATATGAGAAGATAGAGCGTCAAGCTTCTAAGGTGTTCACTTTGGATATTTTTAAAGATGTCAAGTATGAGATTGAAAGGGCAGGTGGTTTAAATGTAATTGAGCGTTCACTTGAAGGGGATAATGTTGTTTTCAAATTAAATGAATATTGTAAGCCTCGTAGTGAACGCTTTGTTGTTTATGATAAAGAGAATTCTAAATTTGTTTGTGATTGTCGGTTGCTTGAATCTTGTGGCATTCCATGTCGACATATTTTTTGTGCTATGAGACTGGAACACATAGATGTTATACCCCCATGTATGATTTGCAAACGATGGAGGAAGGATGTTAAGAGTGACTTGATGATATCAGATGGTTTGGATGAGCGTGAGCATTTTAAGGAGTTTATAAATGACATTATGAAGCTGAAACAGAAGTATGATAGATTATGTTGCACTAGTAGCACAACTAATGTTGAGCTAAATGTTGTACAAGATCCCACTGTTGTGAAGACGAAAGGTGCTCCTATGAAGACAAGGAAGAGGCAAGATGATGAAGTCAACATTAATGAAGAAGACTATGGTCCTGAGTCACAAAGTCTTAGGAGGGATGCTGCCCAAAATCATGATAGAATTTCATCAGATGAAAATTTCCCTGACAGTAGCTCTAATCACGTGTCTGGAAGCATTAGTCATAGTCAGAGTGAAAAAGAAGATGAAGTCCCTTTCACAGATTTCAGACACGAAGTTAAACCTAGTCCCACTGATTGCAATGCAAATGAAGTGTTGAATGGTCCCCATAGAGTTGGGGGAGATACTGCAGGTCCATCATCCACAGCAAAGCAGGAAGTTGAAGGAGGGGTTTCTGTGAATCCCCCTTATCAGAATGGTACATTTAGTTATGACTATCATAACAATGTATCTGCACCATTTTTCAGCTACCAGTTACCAATTGTGGGACCTTCTTCTGTTGGAAACATACAAATACGTGAGGGTATGTCCATTACGTTACCTTATCCAAATTCATCCCATGTTCCTGTATTACCAAGTCAAGGGAGATCTATGCATCATGACTTATTTCCTTTGTTCCCAAATCAATCAACAGTTGGTCTCAATTCTCAACAGTCCACGCATGTAGCAGGAACTGAAGATGGTAGTTGGCCTGGTGTTTGGAATGATCTACTGCAAGAAGTAATTAGAAAAAGTGTTGGTCCAAGTGACAATACTGGAAAAAAATGA 1944 0.3801 MSEMDFNSDDSVVNLDDDRDLSYSDSSSSHEMSSGNDIHSNEENVFIQAEADMDEENDVMDTNVREDVSRRIIDLTNDDIWALEFASEDHAFNFYLSYAKCHGFAMRKDDVLRDSKGMVIMRQYLCSRAGMRDKKHLIMLDRKKEHKPLTRTNFQAKLKVRFDYKTGKWKVVSFEESHNHDLTPAMFVPIIRNYRGLTDRDKAQVDALHSHGIRPFQIMGFLVDQKGGYRNVGFSKKDLYNYIYEKIERQASKVFTLDIFKDVKYEIERAGGLNVIERSLEGDNVVFKLNEYCKPRSERFVVYDKENSKFVCDCRLLESCGIPCRHIFCAMRLEHIDVIPPCMICKRWRKDVKSDLMISDGLDEREHFKEFINDIMKLKQKYDRLCCTSSTTNVELNVVQDPTVVKTKGAPMKTRKRQDDEVNINEEDYGPESQSLRRDAAQNHDRISSDENFPDSSSNHVSGSISHSQSEKEDEVPFTDFRHEVKPSPTDCNANEVLNGPHRVGGDTAGPSSTAKQEVEGGVSVNPPYQNGTFSYDYHNNVSAPFFSYQLPIVGPSSVGNIQIREGMSITLPYPNSSHVPVLPSQGRSMHHDLFPLFPNQSTVGLNSQQSTHVAGTEDGSWPGVWNDLLQEVIRKSVGPSDNTGKK 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi561g00020 647 Pfam FAR1 DNA-binding domain 93 183 IPR004330 -
Sebi561g00020 647 ProSiteProfiles Zinc finger SWIM-type profile. 300 335 IPR007527 GO:0008270
Sebi561g00020 647 PANTHER OS01G0519700 PROTEIN 245 359 - -
Sebi561g00020 647 MobiDBLite consensus disorder prediction 431 451 - -
Sebi561g00020 647 SMART 26again6 310 337 IPR006564 GO:0008270
Sebi561g00020 647 MobiDBLite consensus disorder prediction 26 41 - -
Sebi561g00020 647 MobiDBLite consensus disorder prediction 408 477 - -
Sebi561g00020 647 MobiDBLite consensus disorder prediction 1 41 - -
Sebi561g00020 647 MobiDBLite consensus disorder prediction 452 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi561g00020 Sebi-Chr561 415544 418938 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi561g00020 FAR1 2.2e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi561g00020 - - ccaj:109794460 230.72