Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi561g00019 ATGGGGTATCCTTTGGAAGCTCTGCCACTTGGTGTACAACTAGATGAAGTTGTAGACTTGAAAATGTGTCACAGCAAAATAAAAAAGATTTGGAAAGGAAATCAGACCTTGACAAAGTTGAAGTTCATTGATCTAAGCCATTCCAAAGATCTAATTCAAACCCCTATAGTTTCTGGGGCTCCATGTCTGGAAAGTTTGCTTCTTGAAGGTTGTATAAACCTTGTTAAGGTTCATCGATCTGTCGCAAAACACAAGAAGCTTGTTGTATTGAACTTGAAAGATTGCATAAATCTTCAAATCCTTCCAAGAAAATTGGAAATGGATTCTTTGGAGGAGTTTATTCTTTCTGGCTGCTCAAAAGTTAAAAATCTCCCTAAGTTTGGGAAGAATATGAAAAGTTTATCCTGGCTTAATTTGGAGGATTGCAATAACCTTCTATATCTGCCAAATTTTACTTGCAATCTGAAATCTCTTAGAATTCTCAATATCTATGGTTGCTCAAAAATTTCTAAACTACCCAACAATATGAATGAAAATGAGTCTTTGGAGGAACTTCATATGAATGGGAGTGCCATAAGAGAAATCACTTCATCCAAAGTTTGTTTAGGAAATCTAAAAGATCTCTCCTTTGGTGGAAGAATAGAACTAGCATCCAACTCATGCAACTTACTTCAATGGATCTTGAAGTTTAAGAAGCAACCAATTCCAATAATGGAGTTGATCTTGCCTCCTCTTTCACATTTATCCAGATTGAAGTTCTTGGATTTAAGTTACTGTGACCTTAAGGATGAATCAATTCCGGGTGATCTTGGTTCCTTATCATTTTTGCAAGGTTTAGATCTAAGTGGGAACAATTTTGTTAATCCACCTACACACTGCATTAGTAATCTTTCCATGCTGCAGAGTTTGACCATAACTGATTGTCCAATGCTTGAGTCATTGCCTATGCTTCCACCAAATGTACAATGCTTATTTGCAACTAATTGCACCCAAATGAAACCCTTAAATTTGGATGCACAAATGCTATGGAACATCTTTGAGTCACATATGAATCAGATGGAAGATAAGCCACATCTTTGGTTCATCATTCCTGGGAGAGAAATTCCACCATGGTTTGACAATAAAAATATGATTTGA 1137 0.3615 MGYPLEALPLGVQLDEVVDLKMCHSKIKKIWKGNQTLTKLKFIDLSHSKDLIQTPIVSGAPCLESLLLEGCINLVKVHRSVAKHKKLVVLNLKDCINLQILPRKLEMDSLEEFILSGCSKVKNLPKFGKNMKSLSWLNLEDCNNLLYLPNFTCNLKSLRILNIYGCSKISKLPNNMNENESLEELHMNGSAIREITSSKVCLGNLKDLSFGGRIELASNSCNLLQWILKFKKQPIPIMELILPPLSHLSRLKFLDLSYCDLKDESIPGDLGSLSFLQGLDLSGNNFVNPPTHCISNLSMLQSLTITDCPMLESLPMLPPNVQCLFATNCTQMKPLNLDAQMLWNIFESHMNQMEDKPHLWFIIPGREIPPWFDNKNMI 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi561g00019 378 Pfam Leucine Rich Repeat 18 35 IPR011713 -
Sebi561g00019 378 Gene3D Ribonuclease Inhibitor 129 354 IPR032675 -
Sebi561g00019 378 Gene3D Ribonuclease Inhibitor 2 127 IPR032675 -
Sebi561g00019 378 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 107 225 - -
Sebi561g00019 378 SUPERFAMILY L domain-like 2 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi561g00019 Sebi-Chr561 404267 405585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi561g00019 3 210 WRKY Transcription Factor Family AT4G12020 34.746 1.34e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi561g00019 - - gmx:100799850 501.13