Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi561g00016 ATGAATATGAATTTTGAAAATAATGAAGATGGTTTTCGTTTCTTGGTGGAGGATGAAGTTGGAGGTGTATTTGTAGTAGATGAAACTTGGATTGACAAATGTGTAGTTGAAGATGAAGGGGAAAATGGTAATGGTCATGATAAGGGTGAAAATGTTGTTTCTCCTCGTTCTGAGTATAAGGTTAACAATAATGGGGGAAAAAAATTAATGAACAATGAAGATGATATTCTGAATATGGGGGAGCTCAATTTGTTTAGTCCCCATGAAATTAAGAATTGGGAATTTGGTAATTTGGATGTGGCTTGCAAGTTCTATTTTGAATATGCAAAAGCCAATGGATTTAGTATACGCAAGGGCAGAACATTGAGGAATAGGAAGACCTTGGAGGTGTATCAGAAAGAATTTTTATGCTCCAGAGCCGGTACCCGTGAAGATAGGGGTCTTAGAATGGAAGATACGGTTCGTGAGCCTAGAGTTGTAACTAGATGGGCAGTTCATTGCAGTATGCTTCCTGCCTATAGAAAAATGGGTGACAGTGATGTGGTACAAATGAACAACATGATTAAGCGGCGGAAGGTTTGTTCTGATGCTAAAGGTGCTATCCAATTCCTTGGTGAGCTTCGACTGATTGATACTATGATGTATTTTGAACACACCGTTGATGCAGAAGGTAGGCTTCAACATCTATTTTGGAGTGATGGCATGAGTCAAGTGGATTACAAGTTGTATGGGGAAGTGTTGGCATTTGATGCAACCTATGAGTTCACAAAAGCGTTTGAGGATTGTATGCTTCGTTACTATGATATTGCGACATTTCGGAGAAAATGGAATGAAATTATAACAAAATTTGGTCTTGAAGAGAATCCTTGGGTTGTTGGTTTGTTTGAAAAGAGGACTATGTGGTCTACAACTTATCTTAGGGGGAAATTCTTTGGTGGATTCAGAACAACTTCTAGGTGTCATATGCGTTTCAAAGAGAAAGAAGATGATTTCACATCAATACATGGGGACCCTGTAATGCAAAGTCAGCTCCAATCACTTGAAAGTTATGCTGCCATAGTGTACACAAGGAGAGTATTTTTCTTGTTTCGGCGGGTGTTGCATAGGGCGTCACAGTTGGTAGTCATTGGATATACCCAAGCTGTTCGATGCACTATATTCAAAGTGAGATGCCAATCTGTTCAGTCATATGAATGTCGTGTATCAGTGTATCCGTCCACAAAAGAATTTAAATGTGGTTGTTTAAAAATGGAGTCAAGAGGCTTACCGTGTGAGCATATTATTGCTGTCTTGGATCACTTGGGGATTGATGAAATACTAGATACATTGGTTCTAAAACGGTGGACGAAGGGTGCTAAAGACGGTATATGTGGAGAAGATGGGGAGATATACGAAACATGGGATGCTGCTAGGAGTGCTCGGAGGGCAGCGCTAAATGGTTGGTACGATCAAGTTAGTTGTTTTAAGGCTGAAACTATAGAAAAATATAATATAGAGCGAGACAGGATACTTACTGACCTCAAAGAATGCAGGGCGGAAAAATCGGCCGAACAAGAAAGATGTGGGTTTTCTGGTAATGTTGCTAATGACACATTGAGGAACCCCGTGCGTGCAGCAACCAAGGGCAGCAGGGTTGCAACATCTTCTTCTGGTATAAGAGTTAGAAGAAAACAAAATTGTTCTATTTGTAAGCTTCCGGGACGCAACAAATTGAAATGCCCAAGGGGTGCACAACAATATGAACCAACACAGCAAGGTGGAGCAGCTGGAACCTCTCAGACTGCTGAACATGATGATGTTTTTCATGATTATGAAGAATTTGATCTTGATAATTGGACTTTTGAGTAA 1848 0.401 MNMNFENNEDGFRFLVEDEVGGVFVVDETWIDKCVVEDEGENGNGHDKGENVVSPRSEYKVNNNGGKKLMNNEDDILNMGELNLFSPHEIKNWEFGNLDVACKFYFEYAKANGFSIRKGRTLRNRKTLEVYQKEFLCSRAGTREDRGLRMEDTVREPRVVTRWAVHCSMLPAYRKMGDSDVVQMNNMIKRRKVCSDAKGAIQFLGELRLIDTMMYFEHTVDAEGRLQHLFWSDGMSQVDYKLYGEVLAFDATYEFTKAFEDCMLRYYDIATFRRKWNEIITKFGLEENPWVVGLFEKRTMWSTTYLRGKFFGGFRTTSRCHMRFKEKEDDFTSIHGDPVMQSQLQSLESYAAIVYTRRVFFLFRRVLHRASQLVVIGYTQAVRCTIFKVRCQSVQSYECRVSVYPSTKEFKCGCLKMESRGLPCEHIIAVLDHLGIDEILDTLVLKRWTKGAKDGICGEDGEIYETWDAARSARRAALNGWYDQVSCFKAETIEKYNIERDRILTDLKECRAEKSAEQERCGFSGNVANDTLRNPVRAATKGSRVATSSSGIRVRRKQNCSICKLPGRNKLKCPRGAQQYEPTQQGGAAGTSQTAEHDDVFHDYEEFDLDNWTFE 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi561g00016 615 Pfam FAR1 DNA-binding domain 103 185 IPR004330 -
Sebi561g00016 615 Coils Coil 493 513 - -
Sebi561g00016 615 MobiDBLite consensus disorder prediction 574 595 - -
Sebi561g00016 615 ProSiteProfiles Zinc finger SWIM-type profile. 397 435 IPR007527 GO:0008270
Sebi561g00016 615 MobiDBLite consensus disorder prediction 578 592 - -
Sebi561g00016 615 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 90 254 IPR031052 GO:0006355
Sebi561g00016 615 SMART 26again6 410 437 IPR006564 GO:0008270
Sebi561g00016 615 Pfam SWIM zinc finger 411 434 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi561g00016 Sebi-Chr561 318779 321381 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi561g00016 FAR1 7e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi561g00016 - - ccaj:109791041 261.151