Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi561g00011 ATGAAAATCATTCAGAGAGAAGCAACTAAAAGAAGTGAGTTACTGTGTTTTCCAAAGCCTACTATACCTGCTGTTGTGAGTGGGAACATTGACCCAGAACCACCTGATAAACGCAAAATAAAGGAGAAAGGTACTTATCATGTAACCCTCAATCCTGCTGACTTGGAAAGAGTGAGGGAGGTGGAGGCTTCGTTCCAGAAAGCAACTCCATCAGAAAATTTGGTTGAGGCTACAAGGTCTAAACACAGGAGGTTGTTATCCCCTGTAAGAGAAGAAGCTCCTCCCCAAATGATCACTAGAAGCAAATCAATCCCAAAGGATGATGCTGGAATTTTTCAAGAAGCACTGAAACAGTCCTACATTGTGTACTTGGGAGGGCATTCTCACGGCCCACACCCTTCGCCTACTGATCTGGAAAGAGCCTCTAATTCCCATTATGATTTACTCGCTTCCGTCTTGGGAAGTCATGAGAAGGCCAAGGAAGTAATTGTTTACTCGTATAATAAGCACATAAACGGCTTTGCTGCGCTGCTTGAACAAGAAGAAGCATCAGAGATAGCAAAAAACCCAAATGTAATTTCTGTTTTCTTGAGCAAAGAACATAAATTGCACACTACCAGGTCATGGGAGTTTCTTGGACTGGAAAAAAATGGAAGAATTTCAGCAAACTCCGCCTGGAAGAAGGCAAGATTTGGAGAAAATACAATTATTGCTAATATCGATTCAGGTGTATGGCCAGAACACCCGAGTTTCAACGACAAAGGATACGATCCAGTCCCATCAAAGTGGCGTGGGAAAAGAGTCTGTGAGATTGACCATCATAGTGGCTCAGGAAAAAAAATCTGTAACAGGAAGTTGATTGGAGCAAGAATGTTCAGCAAAAACTATGAGGCAGAAGTTGGGCAGCTAGACCCTATGTTTCGGTCTGCACGTGATTTTGTGGGGCACGGTACCCACACACTATCAACTGCAGGTGGAAATTTCACTCGTGGTGCACATGTGTTTGGTAATGGTAATGGCACTGCCAAGGGTGGATCCCCAAGGGCTCGTGTTGTAGCCTACAAAGTGTGTTGGTCCATACGCGAAGCAGGGGGATGCCATGAAGCAGACATATTAGCAGCATTTGATCACGCCATAAGTGATGGTGTTGATGTCATCAATCTTTCTATTGGTATGTTTATCCCTCGTTCTCAAGGCTTGTTAACAGATGGGCCTTCCATTGGGGCCTTTCATGCTGTTGCTAGAAATATTGTCGTCGTTTGCTCTGCTGGCAATGATGGCCCACAACCTCAAACTGTAACAAATGTCGCACCCTGGTCCTTCACAGTTGCTGTTAGTACATTAGACAGGGATTTTCTAAGCAACATTTCTCTTGGTAACAAACATTACCTAAAGGGTGCCAGTCTTAATAGGGGCTTGCCAGCAGGGTCACGGAAGTTCTATCCTTTGATTCTTTCCGCCAATGCTAGACTTCCGAATGCATCACTTGAAGACGCACGTCTTTGCAAGGCTGGAACACTTGATCCTAATAAAGTAAGAGGAAAATACCTAGTATGTGTTCGAAGTGGGAAAATAAGTTCTGTTGGTGAGGGCCAACAAGCTGCAAATGTTGGCGCAGTGGGAGTGTTTATTAACAATGATTATAAGCAAAGTGGAAACACACTCCCAGCTGAGCCTCATATTTTACCCGGTGCAAGTGTTAATGGTAGTGATTTTGGAGGGGGAAATACAGACCAAAACAATACTAGGAACCTAATTGCATACTTAAGTGCGGCAAGAACATATATAGGAATAAAGCCAGCTCCAATTATGGCTGGATTCTCATCCAAGGGTCCTAGTGCCATGCAACCATTGATACTCAAGCCTGACATAACAGCTCCTGGTGTGAACATATTGGCTGCATATTCTCTAGCCACAGGTCCGTCTAATCTACCATCAGATAGACGACGAATTCCTTTCAATGTACAACAAGGAACTTCTATGTCATGCCCTCATGTAGCTGGCATTGCCGGTCTTCTTAAGACACTTCATCCTAATTGGAGTCCAGCAGCTATCAAATCAGCCATTATGACTACTGCTACCACGCTAGATAACACGAATCGACCGATTCGAGATGCATTTGATCAGATAGCAACTCCATTTGAATATGGTTCCGGACATATTCAACCTAACCTTGCAATGGACCCTGGACTTGTTTATAATCTAAGCACAACTGATTACTTGAACTTCTTATGTGCTTCTGGTTACAATGAAAATTTACTAAAACTATTTAATCAACGTTCTTACACTTGTCCAAAGTCTTATAACATTGAAGATCTCAACTATCCTTCAATCACAGTAACTCATCGCGGGACAAACCCTATCAAAGTTACTCGTACAGTTACAAATGTTGGGCCTTCTGGCACATATGTTGTTAAAACTCACATACTTGAAGGATTTAAGGTTCTTGTTCAACCAAGTTCATTGACCTTTAAGACAATTGGAGAAAAGAAGACCTTTCAGGTTATTCTGAATGTAACGAGTGTGCCTCATCATGGTTTTCCAATATTTGGGAGCTTGTCTTGGACAGATGGTAAGCATAAAGTAACCAGTCCTATTGTTGTTCTCTAA 2610 0.4264 MKIIQREATKRSELLCFPKPTIPAVVSGNIDPEPPDKRKIKEKGTYHVTLNPADLERVREVEASFQKATPSENLVEATRSKHRRLLSPVREEAPPQMITRSKSIPKDDAGIFQEALKQSYIVYLGGHSHGPHPSPTDLERASNSHYDLLASVLGSHEKAKEVIVYSYNKHINGFAALLEQEEASEIAKNPNVISVFLSKEHKLHTTRSWEFLGLEKNGRISANSAWKKARFGENTIIANIDSGVWPEHPSFNDKGYDPVPSKWRGKRVCEIDHHSGSGKKICNRKLIGARMFSKNYEAEVGQLDPMFRSARDFVGHGTHTLSTAGGNFTRGAHVFGNGNGTAKGGSPRARVVAYKVCWSIREAGGCHEADILAAFDHAISDGVDVINLSIGMFIPRSQGLLTDGPSIGAFHAVARNIVVVCSAGNDGPQPQTVTNVAPWSFTVAVSTLDRDFLSNISLGNKHYLKGASLNRGLPAGSRKFYPLILSANARLPNASLEDARLCKAGTLDPNKVRGKYLVCVRSGKISSVGEGQQAANVGAVGVFINNDYKQSGNTLPAEPHILPGASVNGSDFGGGNTDQNNTRNLIAYLSAARTYIGIKPAPIMAGFSSKGPSAMQPLILKPDITAPGVNILAAYSLATGPSNLPSDRRRIPFNVQQGTSMSCPHVAGIAGLLKTLHPNWSPAAIKSAIMTTATTLDNTNRPIRDAFDQIATPFEYGSGHIQPNLAMDPGLVYNLSTTDYLNFLCASGYNENLLKLFNQRSYTCPKSYNIEDLNYPSITVTHRGTNPIKVTRTVTNVGPSGTYVVKTHILEGFKVLVQPSSLTFKTIGEKKTFQVILNVTSVPHHGFPIFGSLSWTDGKHKVTSPIVVL 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi561g00011 869 Gene3D Peptidase S8/S53 domain 235 740 IPR036852 GO:0004252|GO:0006508
Sebi561g00011 869 FunFam Subtilisin-like protease SBT1.5 234 458 - -
Sebi561g00011 869 CDD PA_subtilisin_like 455 571 - -
Sebi561g00011 869 ProSiteProfiles Serine proteases, subtilase domain profile. 208 727 - -
Sebi561g00011 869 CDD Peptidases_S8_3 201 694 IPR034197 -
Sebi561g00011 869 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 109 204 IPR037045 -
Sebi561g00011 869 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 129 868 IPR045051 -
Sebi561g00011 869 Pfam Peptidase inhibitor I9 119 204 IPR010259 -
Sebi561g00011 869 Pfam Fibronectin type-III domain 772 868 IPR041469 -
Sebi561g00011 869 Gene3D - 744 869 - -
Sebi561g00011 869 FunFam Subtilisin-like protease SBT5.3 110 204 - -
Sebi561g00011 869 Gene3D - 449 596 - -
Sebi561g00011 869 PRINTS Subtilisin serine protease family (S8) signature 232 251 IPR015500 -
Sebi561g00011 869 PRINTS Subtilisin serine protease family (S8) signature 657 673 IPR015500 -
Sebi561g00011 869 PRINTS Subtilisin serine protease family (S8) signature 312 325 IPR015500 -
Sebi561g00011 869 Pfam Subtilase family 232 699 IPR000209 GO:0006508|GO:0008236
Sebi561g00011 869 SUPERFAMILY Subtilisin-like 203 731 IPR036852 GO:0004252|GO:0006508
Sebi561g00011 869 ProSitePatterns Serine proteases, subtilase family, serine active site. 658 668 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi561g00011 Sebi-Chr561 251193 278769 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi561g00011 119 868 Subtilisin-like Serine Gene Family AT2G04160 52.590 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi561g00011 - - gmx:100794135 1147.5