Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi560g00010 ATGGTTTCAGAAGGGATTAACGGAGAAGAATCCCTGGACACAGAAAATGATGACGTTTTTAAAAAGGAAAAAGAAGAACGATGGAGTAAAGTTCCCACTCCCAGACCATGTGAACTGTATGTGTGCAATTCCTCCAGAAGCTATAATGTAACAAACTTACTTGATATCTCCAACCCTCACGGAACCATTCTATATCTAGAGTATCAAGCAGAACCTCCTGTGGCGTCCTCCCAGTCGAATCTTATTTCTCGTTGTTTGATACTCTTAGGGGTCGACTGTAGAATTTCACTTCTTAGAACCTGTAGTAATCGCAATCGTGGAACCGATTTTCTCCATTGTAGCGGTGAAACAGCAGAGATCCTGAGTGGTCCTTCTCCACGCGCGGTCATTGGTTCCTTGTTCGGATTCTGTGATATCTATGCAATGGTTCTTTTAATGGACGATTCTATGTCTGCATCTAGGATTCTCAATGATGATCAACAACAACCACAGGGTGACGATGTAATGCCAAACTCAAATCCTGATTCTAATGTCAGTGAGCAAGGTGAGGAAATGAATGCATATTGTGATGGTCAAGAGGTCGTGGATGTGTATAGGATTGATGAAGGTTTTGATTCCAGCAAAGTGGACTTCATTAGTTTAACTGAAGATGATATTATGTTGTATCACTTTAGCAATGTTGATGTGGTTTTTGAATTTTACAACACATATGCACAGAAGAGGGAGTTTGCAGCTCGTAAATGGAATGTTGTAAAAAATAAGCATGGACAAGTGACTCAGAAAACATTTGTTTGTTTCAAGCAGGGTTATTGTTTGAAGAAGCATTTGATGAAGAAAAATCGTAAGAGGGAACCAAGAGTGTTAACTAGGAAGATGCATGAATGTGACTTAATGCAGTTGAATAGCATGAGGGATGCTGGGATTGGTGTAACTCAAATATACGGGTTAGCTGCAAATCAGTTAGGGTTTAGAACAACATCAAGGTGCGAGGGGATGCATGCTCAGGTTGGTAGATATGTACACTATCGTAACAACCTTACGAAGTTTCTAAAGCAGTTCACGCGTTATTTGGGGTACACGAGGCAATGGGAGCTAGAGGCCGATTTTGAATCAATCATTGGTGAGCCTGTGATGCAGACATCTTTTGAGGATATTGAGCGGTCTGCAGCGCAGGTGTATACAAGGAAGGTATTTTTGCTATTTAGGACTCTGTTGGATAGGGCTTGTGGTGTTAAGGTTGTCGGTTGTGAGGAGACACCAAATTACCTCATATATGTTATGTGTAGGCGATCATATCTTGATCGTAAATGGTATGTATCAATGATACCGTCCATCACTGAATTCAAGTGCTCGTGCCTAAGAATGGAGTCAGTTGGGATTCCCTGTGAACATATAATTGCCTTGTTGCGGCACCTAGAGATAAAGGTTTTGCCTGAATCTCTTATCATGCAAAGATGGACAAAGAATGCTAAACAATGTGTTGAGGACAGTGTTGAAAATTCTTGTGGTGTGGGGCGTTCTAAAGTTATATCTTTGTTGTCCGATTGCTATGAGGTATGCAAGTTGTCTAGCAAGTGTGTGCAAAAGTTAGATCTCTCTAAACGAACCATTAGGGAATTATTGCAACGGTTGAGAGATCCTAACATGCAAAACAACACAGATGGTGGTAATGACAATGATGACGGTGAAGATGTCCATGTGAGAAACCCTGTACGTGCTAGGACTAAAGGTTGTGGACCAAGAACAACTGTAGCAGGCGGTAAGGGAAATAGGCGAACAACTTGTTGTAGCATATGCCAAGAACCGGGACATAACAAGAAGACATGTCCTAATTGA 1836 0.4134 MVSEGINGEESLDTENDDVFKKEKEERWSKVPTPRPCELYVCNSSRSYNVTNLLDISNPHGTILYLEYQAEPPVASSQSNLISRCLILLGVDCRISLLRTCSNRNRGTDFLHCSGETAEILSGPSPRAVIGSLFGFCDIYAMVLLMDDSMSASRILNDDQQQPQGDDVMPNSNPDSNVSEQGEEMNAYCDGQEVVDVYRIDEGFDSSKVDFISLTEDDIMLYHFSNVDVVFEFYNTYAQKREFAARKWNVVKNKHGQVTQKTFVCFKQGYCLKKHLMKKNRKREPRVLTRKMHECDLMQLNSMRDAGIGVTQIYGLAANQLGFRTTSRCEGMHAQVGRYVHYRNNLTKFLKQFTRYLGYTRQWELEADFESIIGEPVMQTSFEDIERSAAQVYTRKVFLLFRTLLDRACGVKVVGCEETPNYLIYVMCRRSYLDRKWYVSMIPSITEFKCSCLRMESVGIPCEHIIALLRHLEIKVLPESLIMQRWTKNAKQCVEDSVENSCGVGRSKVISLLSDCYEVCKLSSKCVQKLDLSKRTIRELLQRLRDPNMQNNTDGGNDNDDGEDVHVRNPVRARTKGCGPRTTVAGGKGNRRTTCCSICQEPGHNKKTCPN 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi560g00010 611 MobiDBLite consensus disorder prediction 544 585 - -
Sebi560g00010 611 SMART 26again6 448 475 IPR006564 GO:0008270
Sebi560g00010 611 ProSiteProfiles Zinc finger SWIM-type profile. 438 473 IPR007527 GO:0008270
Sebi560g00010 611 MobiDBLite consensus disorder prediction 159 183 - -
Sebi560g00010 611 MobiDBLite consensus disorder prediction 1 27 - -
Sebi560g00010 611 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 324 543 IPR031052 GO:0006355
Sebi560g00010 611 Pfam SWIM zinc finger 449 472 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi560g00010 Sebi-Chr560 195426 200701 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi560g00010 SWIM 2.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi560g00010 - - tpra:123905832 226.868