Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi560g00002 ATGGCGCTCATCAAAGAAACAATCTTAGCTCCTGAACTATACAATGGAGAAGGTCAAGGGAATGATAACTTAATTAGTATGAGTCCTACCATTTCTCTGCTAAATTTGTGGACTAGTAAGATAGAGGCAGAAGGTGGAACTGCAGATATAAAAATTGATGACTACATGACAAGATTCTCTGGAGATGTTATTTCAAAAGCATGCTTTGGAAGCAATTACTCTGAGGGAGAAACAATTTTCTCTAAACTCACAGCTCTCCAAGATGTAATGTCCAGGCAAAAATGGTCTAATGGGATTCCAGGCCTGAAGGTGGTGGAGAAAGAGAAAAGGAAATTACTCATGAGAAGGATCTGTTTGCAGATGATTCTTGAGGGTGCTAAGAATAGTGATCTCACTCAAGAGGCCACTGACGCTTCATTGTTGATAACCTGCAAGAATATATACTTGGCAGGATATGAGACCACTGCAGTTGCTGCTACATGGTGCCTCATGTTGCTAGCCTCAAATCAAGAGTGGCAAGATCGTGTTCGAGCAGAAGCACTAGAAATCTGCAGTGGTGAAATCCCAAATTATGATATGCTTCGTAAGATGAAGCAGGGTGCTTGTAAGCTGCCACATTTGTATATGCCATTTGGGGTTGGACAACGAGTGTGTCTTGGACGGGACTTGGCCATGATTGAACTTAGATGTTGTTATCTCTGA 702 0.4174 MALIKETILAPELYNGEGQGNDNLISMSPTISLLNLWTSKIEAEGGTADIKIDDYMTRFSGDVISKACFGSNYSEGETIFSKLTALQDVMSRQKWSNGIPGLKVVEKEKRKLLMRRICLQMILEGAKNSDLTQEATDASLLITCKNIYLAGYETTAVAATWCLMLLASNQEWQDRVRAEALEICSGEIPNYDMLRKMKQGACKLPHLYMPFGVGQRVCLGRDLAMIELRCCYL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi560g00002 233 SUPERFAMILY Cytochrome P450 33 230 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi560g00002 233 PRINTS P450 superfamily signature 150 167 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi560g00002 233 PRINTS P450 superfamily signature 209 218 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi560g00002 233 PRINTS P450 superfamily signature 218 229 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi560g00002 233 PANTHER CYTOCHROME P450 FAMILY MEMBER 197 229 - -
Sebi560g00002 233 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 211 220 IPR017972 GO:0005506|GO:0016705
Sebi560g00002 233 PRINTS E-class P450 group I signature 59 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi560g00002 233 PRINTS E-class P450 group I signature 218 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi560g00002 233 PRINTS E-class P450 group I signature 208 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi560g00002 233 Gene3D Cytochrome P450 200 232 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi560g00002 233 Gene3D Cytochrome P450 20 199 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi560g00002 233 Pfam Cytochrome P450 103 198 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi560g00002 233 Pfam Cytochrome P450 203 230 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi560g00002 Sebi-Chr560 19015 20713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi560g00002 8 204 Cytochrome P450 AT5G24910 35.193 5.10e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi560g00002 K24544 - tcc:18591116 241.121