Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi55g00060 ATGGCTGTCTCTTGTCTTTTTATCTTCTTTTTTGCTGCACCTGTTTCAGCTAGCCTTGTTTTCAACTTCTATGAAACTTCATGCCCAACAGCAGAGCTTATTGTAAGAAACACAGTCAGCTCATCCTCTTCCTCTGATCCTTCAATTCCTGGAAAGCTCCTTCGCTTGGTTTTTCATGATTGCTTTGTGGAGGGATGTGATGCATCTTTGATGCTACAAGGGAATAACACAGAGCAAAGTGATCCAGCAAACAGGTCAGTTGGAGGATTTTCAGTCATAGAATCAGCCAAAAGAGTCCTTGAGATGTTTTGTCCTGGAACAGTTTCTTGTGCTGACATAATTGCTTTGGCAGCTAGAGATGCTGTTGCAATTGCTGGTGGTCCTATGATTCCAATTCCCACAGGTAGGAGAGATGGAATGGTTTCAGTTGCTTCAAATGTCAGACCCAACATTATAGACACTAGTTTCACAATGGATGATATGATTAACCGCTTCTCTACTAAAGGATTGTCCTTGCGTGATCTTGTCATACTTTCAGGAGCACACACCATAGGAACAGCTCATTGCAGCTCATTCAGGGATCGGTTCCAAGCAGACTCCAAGGGAAAGCTTATGCTCATTGACAAAACCCTTGACAGAAGCTATGCTGATGAGCTAATTCAAGAGTGTCCATTAAGTGCAAGCCCATTTGTACAAGTTAACAATGATCCTGTAACATCTATGGTCTTTGACAACCAGTACTACCAAAATCTTCTCACCAACAAGGGGCTGTTCCAGTCTGATTCTGTTTTGTTAAATGATGACAGAACAAGGAAATTGGTGGAGAACTTAGCAAATAATCAAGACCTCTTCTTTGATAATTGGGGTCAGTCTTTCATGAAGCTCACCAGTATTGGAGTCAAAACAGGTGATGAGGGTGAGATTCGACGTTCTTGTGCAGCTACTAATGCATGA 954 0.4203 MAVSCLFIFFFAAPVSASLVFNFYETSCPTAELIVRNTVSSSSSSDPSIPGKLLRLVFHDCFVEGCDASLMLQGNNTEQSDPANRSVGGFSVIESAKRVLEMFCPGTVSCADIIALAARDAVAIAGGPMIPIPTGRRDGMVSVASNVRPNIIDTSFTMDDMINRFSTKGLSLRDLVILSGAHTIGTAHCSSFRDRFQADSKGKLMLIDKTLDRSYADELIQECPLSASPFVQVNNDPVTSMVFDNQYYQNLLTNKGLFQSDSVLLNDDRTRKLVENLANNQDLFFDNWGQSFMKLTSIGVKTGDEGEIRRSCAATNA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi55g00060 317 Pfam Peroxidase 35 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi55g00060 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 174 184 IPR019793 -
Sebi55g00060 317 CDD secretory_peroxidase 19 315 IPR033905 GO:0004601|GO:0042744
Sebi55g00060 317 PANTHER - 4 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi55g00060 317 ProSiteProfiles Plant heme peroxidase family profile. 18 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi55g00060 317 FunFam Peroxidase 22 163 - -
Sebi55g00060 317 PRINTS Plant peroxidase signature 107 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi55g00060 317 PRINTS Plant peroxidase signature 88 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi55g00060 317 PRINTS Plant peroxidase signature 173 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi55g00060 317 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi55g00060 317 PRINTS Plant peroxidase signature 126 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi55g00060 317 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi55g00060 317 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi55g00060 317 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi55g00060 317 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi55g00060 317 Gene3D Peroxidase, domain 2 152 295 - -
Sebi55g00060 317 SUPERFAMILY Heme-dependent peroxidases 19 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi55g00060 317 PRINTS Haem peroxidase superfamily signature 174 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi55g00060 317 PRINTS Haem peroxidase superfamily signature 126 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi55g00060 317 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi55g00060 317 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi55g00060 317 PRINTS Haem peroxidase superfamily signature 108 125 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi55g00060 317 Gene3D - 22 316 - -
Sebi55g00060 317 FunFam Peroxidase 152 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi55g00060 Sebi-Chr55 1745811 1747475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi55g00060 16 316 Peroxidase AT4G31760 63.787 1.09e-148 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi55g00060 K00430 K18328 gmx:100793440 524.628