Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi55g00054 ATGGGCTACCTCAATTCAGTTTTATCATCTTCAAGCCAGGTTCATGCTGCTGAAGATTCACCCGTGAGCGGTGGGGGCCTCAGTCAGAATGGCAAGTTCAGCTATGGGTATGCTAGCTCCCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGATGGTGTTGATGGTGAAATTGTTGGCCTTTTTGGAGTTTTTGATGGTCATGGTGGTGCTCGTGCTGCTGAGTATGTCAAGCAAAACCTATTTAGTAATTTGATCAGACACCCAAAATTCATTTCTGACACCAAATCTGCAATAGCTGATGCATATAACCATACCGACTCTGAATTTCTGAAATCGGAAAATAATCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATTCTTGTTGGTGACCGTCTGCTTGTTGCAAATGTTGGAGACTCCAGAGCTGTTATATGCAGGGGTGGAAATGCCATTGCTGTTTCTCGTGATCACAAACCAGACCAAACTGATGAGAGGCAAAGGATAGAAGATGCAGGGGGCTTCGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCCTGAAACAGTATGTTGTTGCTGATCCAGAAATCCAGGAAGAAAAAGTTGACAGCTCTCTTGAGTTTCTTATATTGGCCAGCGACGGGCTATGGGACGTTGTCTCAAATGAGGAAGCTGTAGCTATGATTAAGCCAATTGAGGATGCAGAGGAGGCAGCAAAGAGGCTGATGCAAGAAGCATATCAAAGAGGTAGTTCTGACAATATTACTTGCGTTGTTGTTCGTTTCTTGATGAACCAAGGTGCTTCCTCTCGTAGTAACTCTGGCTAA 882 0.4433 MGYLNSVLSSSSQVHAAEDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIRHPKFISDTKSAIADAYNHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIEDAEEAAKRLMQEAYQRGSSDNITCVVVRFLMNQGASSRSNSG 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi55g00054 293 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Sebi55g00054 293 SUPERFAMILY PP2C-like 28 280 IPR036457 -
Sebi55g00054 293 CDD PP2Cc 33 280 IPR001932 -
Sebi55g00054 293 Pfam Protein phosphatase 2C 63 273 IPR001932 -
Sebi55g00054 293 FunFam probable protein phosphatase 2C 59 26 284 - -
Sebi55g00054 293 SMART PP2C_SIG_2 45 280 IPR001932 -
Sebi55g00054 293 SMART PP2C_4 24 278 IPR001932 -
Sebi55g00054 293 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Sebi55g00054 293 PANTHER PROTEIN PHOSPHATASE 26 279 IPR015655 GO:0004722|GO:0006470
Sebi55g00054 293 Gene3D - 26 285 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi55g00054 Sebi-Chr55 1667387 1672442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi55g00054 1 292 PP2C-type Phosphatase Gene Family AT4G31750 91.438 0.0 542