Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi55g00041 ATGAGCAACCTAAAAAATTTGGAATCTAATGATGAAGGCTTGGTTCATACTGATGAGCAATGTGGTCAACAATCTGATCAACAAGCTGAATGTTTAAAAAAGATAAATGAACTTACAGATGATGAAATTAGGGCCCTTGAGTTTGATTCGGAAGAGCATGCTTATGAATTCTATTCTGAGTATGCTAAAGTGATAGGATTTGCTGTCAGGAAAGATGAAGTTTATCGTGATCGTAATGATGCTATCACATTGAGGCAATTGATTTGTAATAGGCAGGGAGAGAGATGTGAGAAGCATTTAAATAGAACTGATAGAGTAAGGGAGGCTAAGCCAATAACTCGTACCACAATGCAGAAGTTTGAGGATTTGTGGAACAATGTCATTGAGAAACATGGACTTGGCAATAATAAATGGGTTAGAAAGGTCTATGATATGAAGAAGATAACTACTTCAATTTGTGAAGGTATAAACTCTTTCATTAAGAGGAAGGAAATTGAGAAAGTTGTTGCTTTGAATGTTATTGAGAGGCTTAACAAGGCAGCACACATTAATCCTCATAATCTTTTGAGAAACATTGAAGCTATTCACAAGTTGGCTGATCAGATGGAAAGGCAGGAAGATGAAGAATCAAGATATGGAACTGGTTCTGTTGATATTGCTTCTTCCAAGCATGCTAATCATGTAACTCTTTCCCTAGATGGTAATAGTGCTTCAGGAAATGGCCATTCAAAGTTTGTACACATGAAAAAGAAAAGGAAACCCTATGAGACAGTTAAACTGACACAAGAATCAATAAACGAAAAGAGTTCAAATGATTTTTCCAATGGTGTAATGATGTTCAGATGA 846 0.3582 MSNLKNLESNDEGLVHTDEQCGQQSDQQAECLKKINELTDDEIRALEFDSEEHAYEFYSEYAKVIGFAVRKDEVYRDRNDAITLRQLICNRQGERCEKHLNRTDRVREAKPITRTTMQKFEDLWNNVIEKHGLGNNKWVRKVYDMKKITTSICEGINSFIKRKEIEKVVALNVIERLNKAAHINPHNLLRNIEAIHKLADQMERQEDEESRYGTGSVDIASSKHANHVTLSLDGNSASGNGHSKFVHMKKKRKPYETVKLTQESINEKSSNDFSNGVMMFR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi55g00041 281 Pfam FAR1 DNA-binding domain 56 115 IPR004330 -
Sebi55g00041 281 MobiDBLite consensus disorder prediction 231 253 - -
Sebi55g00041 281 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 115 - -
Sebi55g00041 281 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi55g00041 Sebi-Chr55 1265747 1269857 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi55g00041 FAR1 1.3e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi55g00041 - K17604 lja:Lj1g3v4467990.1 110.538