Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi55g00008 ATGGAGGAGGTGTTGTTCGTGGTTACAGTGCCATTAAGAGTAGGTAACTCAGTCTGTGATAACCCAACCGTAGCTACCCACATGGATGTACCCAGATTTAAACTGATGGCAGATGCAGGGTCCTTATCTAATTCTGTAACTAAGGTTTCCACTGAGACGGTTGCAGGTTCCAAAGATGGTCATAATGGTGACAATTTGGAGGATGAAGTTGGTACTACAGAAGTCACACCCCCAGAACCGGATAGGGAAGGAGAAAGTCCTTTGTTGGATATGATATCTCAAAATAAAAGCACTTTTGTTGCTGGTGATGTAGCTTTAACCCAAGAAATTGAGGAGGATGATTCATTGTCATTAGAAGTCAGTGAGAACAGTAGTGTATGTGGAGAAGAGTTAATCAATTCTGATGCTACTTCAGAAGTTGGGACACCATGTTCCATAGACATAGAGAAGAGCATCTGTCCTGCCAATAATGTTTCCCAGGCTAGTGATTTGGGGGAGTCAAATGTTGATGCAGATATTATGAGTGAACCCCTTGCTGTTGCAGTGAGCCTTGATGAAGAGACTGGAGTTGGATCTGGCCCAAAACCTTCTACAGTTGATCTTCAACAGCTGCCTCAGGAAAAGACAGCTATGACCCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTGGCAAAGTATTGTCGTGATCGTATCCATTTGGCCTTGTCTGAGGAAATAGAATTTGTCAAGGAAGGTCTAATTAATGGAAGTATCAAGGATGGTTGTCAAGACCAGTGGAGAAAAGCTTTCACCAATTGTTTCTTAAAGGTTGATGCTGAAGTTGGAGGAAAAGTTAATAATGAACCTGTTGCCCCAGAAACTGTTGGCTCTACTGCTGTTGTTGCTCTTATCAGTTCATCTCATATTATAGTTGCAAATTGTGGTGATTCAAGAGCGGTTCTATGTCGTGGAAAAGAACCGATGGCATTATCAGTGGACCATAAACCAAACCGAGATGATGAATATGCAAGAATTGAGGCAGCTGGAGGAAAGGTGATACAATGGAATGGCCATCGTGTATTCGGTGTTCTTGCAATGTCCAGGTCTATTGGTGATAGATATTTGAAACCATGGATTATTCCAGAACCAGAAGTTAGGTTTCTTCCTCGTGCGAAAGATGATGAGTGTCTCATTCTGGCCAGTGATGGTCTGTGGGATGTCATGACAAATGAAGAGGTGTGTGATCTGGCTCGGAAAAGAATACTTCTCTGGTACAAAAAAAATGGCTTGGAACTACCCTCTGAAAGAGGAGAGGGAATTGATCCTGCTGCACAAGCAGCAGCAGAGTACCTATCAAACCGTGCTCTTCAGAAAGGAAGCAAAGATAACATCACTGTGATTGTGGTGGATTTGAAACCTCAAAGAAAATATAAGAGCAAGACATGA 1434 0.4275 MEEVLFVVTVPLRVGNSVCDNPTVATHMDVPRFKLMADAGSLSNSVTKVSTETVAGSKDGHNGDNLEDEVGTTEVTPPEPDREGESPLLDMISQNKSTFVAGDVALTQEIEEDDSLSLEVSENSSVCGEELINSDATSEVGTPCSIDIEKSICPANNVSQASDLGESNVDADIMSEPLAVAVSLDEETGVGSGPKPSTVDLQQLPQEKTAMTHFFGVYDGHGGSQVAKYCRDRIHLALSEEIEFVKEGLINGSIKDGCQDQWRKAFTNCFLKVDAEVGGKVNNEPVAPETVGSTAVVALISSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVRFLPRAKDDECLILASDGLWDVMTNEEVCDLARKRILLWYKKNGLELPSERGEGIDPAAQAAAEYLSNRALQKGSKDNITVIVVDLKPQRKYKSKT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi55g00008 477 FunFam Protein phosphatase 2C 51 173 475 - -
Sebi55g00008 477 PANTHER PROTEIN PHOSPHATASE 176 467 IPR015655 GO:0004722|GO:0006470
Sebi55g00008 477 Gene3D - 179 477 IPR036457 -
Sebi55g00008 477 SUPERFAMILY PP2C-like 212 469 IPR036457 -
Sebi55g00008 477 ProSitePatterns PPM-type phosphatase domain signature. 214 222 IPR000222 GO:0043169
Sebi55g00008 477 ProSiteProfiles PPM-type phosphatase domain profile. 198 467 IPR001932 -
Sebi55g00008 477 SMART PP2C_4 150 465 IPR001932 -
Sebi55g00008 477 MobiDBLite consensus disorder prediction 50 87 - -
Sebi55g00008 477 CDD PP2Cc 212 467 IPR001932 -
Sebi55g00008 477 Pfam Protein phosphatase 2C 208 460 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi55g00008 Sebi-Chr55 219503 223075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi55g00008 212 477 PP2C-type Phosphatase Gene Family AT1G17550 67.509 3.00e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi55g00008 K14497 - gmx:100805281 703.36