Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi55g00003 ATGGCAGACAGAAATCCAAGATCACCAGATTCATCACCTGACAGTGATTTCACCAACCAGTGGCCTTTTGAGCTCTCTGAGTACTTGAAATTCGATGATAATCCATGGTTACATGATGAGCCGGATTCATTTGTTTCTGAGCATGTTTCAAACCAGTTTTATCAAACCAATTACCAGCCAGGTGATTTTGGAGGAAGTGGAAGCCATGAAGGGTCTTCCAGCAGAGACACTAGCAGTGGGCGGGAGCAGAAGGAAGTTAGAGAGAGAGTTGCGTTCAAAACAAAGTCAGAGGTCGAAATACTAGATGATGGGTATAGATGGAGGAAGTATGGAAAGAAAATGGTGAAGAACAGTCCCAATCCAAGGAATTACTATAGGTGTTCAGTAGATGGATGTCCCGTAAAAAAGAGAGTTGAGAGAGATAAGGACGATGCAATGTATGTAATAACAACTTACGAAGGCATGCACACTCACCCGAGTTCTTGCTAG 489 0.4315 MADRNPRSPDSSPDSDFTNQWPFELSEYLKFDDNPWLHDEPDSFVSEHVSNQFYQTNYQPGDFGGSGSHEGSSSRDTSSGREQKEVRERVAFKTKSEVEILDDGYRWRKYGKKMVKNSPNPRNYYRCSVDGCPVKKRVERDKDDAMYVITTYEGMHTHPSSC 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi55g00003 162 MobiDBLite consensus disorder prediction 48 88 - -
Sebi55g00003 162 FunFam WRKY transcription factor 57 87 161 - -
Sebi55g00003 162 Gene3D WRKY domain 88 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi55g00003 162 ProSiteProfiles WRKY domain profile. 96 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi55g00003 162 MobiDBLite consensus disorder prediction 48 74 - -
Sebi55g00003 162 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 57 160 IPR044810 GO:0003700
Sebi55g00003 162 SMART WRKY_cls 101 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi55g00003 162 Pfam WRKY DNA -binding domain 102 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi55g00003 162 SUPERFAMILY WRKY DNA-binding domain 94 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi55g00003 Sebi-Chr55 115741 117421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi55g00003 36 160 WRKY Transcription Factor Family AT5G26170 53.901 3.35e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi55g00003 WRKY 4.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi55g00003 - - gmx:100796836 237.269