Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi55g00001 ATGAGTTTAAGTCAAACCGAGGATGATTCAATCTCAGAAGCTCACATTCAAGTCCCAGCAGAAATTGACTGGCACATGCTTGACAAATCCAAGTTCTTCTTCCTAGGTGCAGCCTTATTCTCTGGTCTATCAGCTGCACTTTACCCTGTTGTTGTATTGAAAACACGCCAACAAGTTTCCTCAGCAAAGATCTCATGCCGCAACATGTCCTCTGCCATCATGCGCTATGAAGGCTTCAGGGGATTCTACAGAGGCTTTGGCACTTCATTGATGGGAACAATCCCAGCAAGAGCACTTTACATGTCTGCACTTGAAGTCACCAAGAGCCACGTTGGCACTGCTAGTGTTCAATTGGGCCAGAGACTAATGGTTCAAGGTAGTAGCAACAAGTACAACAATGTGATCCATGATCTTAACTCTTACAGGAATGGTTTTGATGCTTTCAGGAAAATCCTCTGTGCAGATGGATTGAGAGGGTTGTATAGGGGATTTGGGGTTTCAATTGTGACTTATGCACCTTCTAATGCGGTTTGGCCTGATTCTAAGGCAATGGTGGGGGTTCAAGGGTTGAGTGCGGTTATGGCTAGTGGAATTTCAGCAATTATGACTATGCCTCTTGACACGGTTAAGACAAGGTTGCAAGTGTTGGATGCTGAGGAGAATGGAAGAAGAAAGCCACTAACTTTTTTGGAGACAGTTAGGAATTTGATGAAGGAAGGTGGAGTCAAAGCTTGTTACAGGGGATTGGGACCAAGATGGGCTTCAATGTCCATGTCTGCAACAACCATGATTACTACCTATGAGTTCTTGAAACGAATGTCTACTAAGAATCTAGATAGATTAAATGAACTGCGTGATAGTATATAA 867 0.4348 MSLSQTEDDSISEAHIQVPAEIDWHMLDKSKFFFLGAALFSGLSAALYPVVVLKTRQQVSSAKISCRNMSSAIMRYEGFRGFYRGFGTSLMGTIPARALYMSALEVTKSHVGTASVQLGQRLMVQGSSNKYNNVIHDLNSYRNGFDAFRKILCADGLRGLYRGFGVSIVTYAPSNAVWPDSKAMVGVQGLSAVMASGISAIMTMPLDTVKTRLQVLDAEENGRRKPLTFLETVRNLMKEGGVKACYRGLGPRWASMSMSATTMITTYEFLKRMSTKNLDRLNELRDSI 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi55g00001 288 Gene3D Mitochondrial carrier domain 180 287 IPR023395 -
Sebi55g00001 288 Pfam Mitochondrial carrier protein 121 177 IPR018108 -
Sebi55g00001 288 Pfam Mitochondrial carrier protein 43 112 IPR018108 -
Sebi55g00001 288 Pfam Mitochondrial carrier protein 188 277 IPR018108 -
Sebi55g00001 288 Gene3D Mitochondrial carrier domain 25 179 IPR023395 -
Sebi55g00001 288 ProSiteProfiles Solute carrier (Solcar) repeat profile. 183 273 IPR018108 -
Sebi55g00001 288 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 110 IPR018108 -
Sebi55g00001 288 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 120 178 - -
Sebi55g00001 288 SUPERFAMILY Mitochondrial carrier 26 270 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi55g00001 Sebi-Chr55 49244 50294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi55g00001 15 277 Chloroplast and Mitochondria Gene Families AT5G26200 57.812 9.81e-126 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi55g00001 K15121 - gmx:100784202 370.933