Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi558g00022 ATGCATCAACCTGGTGAGAATTCCACCTCAAAGCTCCAATGGAAATCATCGCAGAATCCATTTATTTTTGGGAGCTTCAATTCACCAAATCGTTTGAAGGAGGTGAACGCCGGAGACTCCGTTACTCTGCACACCGAAGTTGATTCTTCTAGGATTATCGACAGTGTTTTGGACTCCACTCCCCTTGCGAAATCGTCGTCTTCTTGCAACCTCAAAACAGAGGAAAGAAGGGATGAGATAGTCGATCTCTGCTGCAACCAAGATGCACATGGCGACTCCTCTGCGGTCTTCACTGTCCCTTGCGTCTCCGCGATCACAAAATCTGATTCAGACCTCACCAATCAAATCAGCCGCAAAATCTGTAAGCTAAGTTTTGCACCTGAACAAACTATGGAAGCCTTTGATGTTGCAGGCAATAGCATTAAGCTTATTTATATTGTATTGTCATATTCATTGGAACAAGATGACTCACAGAAACTTATTTCTGATATTACTGGTTCTATTGGAAAAGAGTGTGTTGATCTTTGGTTAAGCATTGCAAATGCAATTGAGCTGTTTGATCAAATGCCTCAACAGACAATTATTGACAACTTAATGGTTCATGAGCTCGTTTCTGGTGGAATTGAAAATCACCTAGTTTTGGTGAATCTGAAAAACAAGGCTAATAAAAACACTATTCCTGGAGATGTGTCTGCTATGGTTCCTGGTGTTCAGAAGTTTGCTGGACAGTTTTATTTGGTGTCCAGGCTTAGCTCCAGCTATCACTCAAGGAACTATTATGCATCTGGTGCCTACATCAATGGAGGGGTGCAGTCTTCTGGTCTGTCGATTGTGTCACCTGTATCTTCAATTATTGTGCCTTCTCCAACAGAAAAAGGAGTATGTGCATTTATGGATGAGGGTGTAATTTCTCTCTGGAGAGGCAATACTGCTAATGTTTTTAGATATTTCTCTGGAATTAGGATGGGAACCCCTGCTCTTACTTCTAGAGGATTTGTTGTGGAGGATTTTATCAAGGTAGCAGAGTTCTTTGGTGCATCAGTAAATTTGGCTGTGAAGATTAAGACAGAGAGCAAAGGAACAAGGCATTGTTGGAGCGTCAGTAAATTTGATGCATCAGTTCAAGGCACAATTACATCTTGGAGTTCTGTTGTTGCTACTCCAATTGAAATGCCAATTGATGTTGGTTTGGAAGCTGCTGGGATTGGTTTCAAGTTTTATGAAGATCCCTTTTCTTTTGTTGTGTTCCTCTTTTGGTTTCAAGTTGATATTGGTTGA 1278 0.4116 MHQPGENSTSKLQWKSSQNPFIFGSFNSPNRLKEVNAGDSVTLHTEVDSSRIIDSVLDSTPLAKSSSSCNLKTEERRDEIVDLCCNQDAHGDSSAVFTVPCVSAITKSDSDLTNQISRKICKLSFAPEQTMEAFDVAGNSIKLIYIVLSYSLEQDDSQKLISDITGSIGKECVDLWLSIANAIELFDQMPQQTIIDNLMVHELVSGGIENHLVLVNLKNKANKNTIPGDVSAMVPGVQKFAGQFYLVSRLSSSYHSRNYYASGAYINGGVQSSGLSIVSPVSSIIVPSPTEKGVCAFMDEGVISLWRGNTANVFRYFSGIRMGTPALTSRGFVVEDFIKVAEFFGASVNLAVKIKTESKGTRHCWSVSKFDASVQGTITSWSSVVATPIEMPIDVGLEAAGIGFKFYEDPFSFVVFLFWFQVDIG 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi558g00022 425 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 318 362 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Sebi558g00022 425 SUPERFAMILY PLP-dependent transferases 316 369 IPR015424 -
Sebi558g00022 425 Gene3D Aspartate Aminotransferase, domain 1 310 386 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi558g00022 Sebi-Chr558 412231 413806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi558g00022 238 298 Antiporters AT4G28390 40.000 1.22e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi558g00022 K00600 - gmx:100499635 76.6405