Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi558g00005 ATGGCTGGTGATAGATGCTCTTCCATGACTACCGTACCCTTATTGGGTGATGAAGAAGAAGTGAATAATAATGATTCAAGTGAGGGGGAGGTGAACAAAATTGAAGATATACACACTGTGGATGTGGGTAGCACCTCCTTATTCAAGACTGGCTTCCATCTTGTTAATGCTATCTCAGGAGTTGGTATTGTATCAATACCTTATGCATTGGCATCTGGTGGATGGTTAAGCATATTGCTACTATTTGTGATTGCCATTGCTTGTTGTTACACTGGCATATTGGTCAAAAGATGCATGGATATAGACCCTATTATCAAGACTTTTCCTGACATAGGTCACCGTGCATTTGGAGACAAAGGGAGACTAATGGTATCAATCATCATGAATTGTGAGCTATACCTTGCTGTAACAGGCTTTCTGATTTTACAAGGGGACAATCTAAACAAATTAGCACCAAACATGCAACTTGACATTGCAGGATTAACAATTGGTGATACAACAAGTTTTACCATAATTGCTGCCCTTGTTATTTTGCCTACTGTTTTGTTAGAGGACCTGGGCCTGCTATCTTATATTTCTGCTAGTGGGGCTTTAGCTTCTTCCATCTTCATCCTCTCTTTATTCTGGAATGGCACCATTGATGGAACAGGATTTCATGGAAAGGGAACACTTGTTAGATGGAGTGGAATACCTTCTGCTGTCAGTTTATATGCCTTCTGCTATAGTGCTCATCCTGTCCTTCCTACCCTCTACAATTCAATGAGGAACAAAAGTCATTTCTCCAGGGTTCTGTTTGTATGCTTTTCAGGATGCACCCTTGGTTATGCAATTGCAGCTATTTTGGGTTACTTGATGTTTGGTGAAGAGGTTGAATCACAGGTGACTTTGAATCTCCAAACAGGCAAGTTGAGTTCACGCATGGCAATATACACAACCTTGGTCAATCCCATAACCAAATACGCATTGATGCTTACTCCAGTCATAAATGCTGTAAAAAATAAGGTTTCATGGCATTACAACAGAAGGGTCACACATATTCTTGTTAGTACCTCTTTGTTAATCAGTTCTCTTATTGTTGCTGTGACCATTCCCTTATTTGGATACCTCATGTCACTTGTTGGAGCATTACTAAGTGTCACGGCTTCAATTTTAGTCCCATCAGTGTGCTACTTGAAGATTTCAGGAGCTTACAAGAGATTTGGGTCTGATATGATTATCAATTATTCAATAATAGTAATGGGAGTTACTATTGCTATTGTAGAACTTTTGGTCTATGATGAATACTTAAGTTCTTTGTACGAGTATGGCTTTATGTATAAAGAAGTGCTTCTGTGTATACCTTGA 1344 0.3921 MAGDRCSSMTTVPLLGDEEEVNNNDSSEGEVNKIEDIHTVDVGSTSLFKTGFHLVNAISGVGIVSIPYALASGGWLSILLLFVIAIACCYTGILVKRCMDIDPIIKTFPDIGHRAFGDKGRLMVSIIMNCELYLAVTGFLILQGDNLNKLAPNMQLDIAGLTIGDTTSFTIIAALVILPTVLLEDLGLLSYISASGALASSIFILSLFWNGTIDGTGFHGKGTLVRWSGIPSAVSLYAFCYSAHPVLPTLYNSMRNKSHFSRVLFVCFSGCTLGYAIAAILGYLMFGEEVESQVTLNLQTGKLSSRMAIYTTLVNPITKYALMLTPVINAVKNKVSWHYNRRVTHILVSTSLLISSLIVAVTIPLFGYLMSLVGALLSVTASILVPSVCYLKISGAYKRFGSDMIINYSIIVMGVTIAIVELLVYDEYLSSLYEYGFMYKEVLLCIP 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi558g00005 447 Pfam Transmembrane amino acid transporter protein 44 421 IPR013057 -
Sebi558g00005 447 PANTHER OS05G0424000 PROTEIN-RELATED 49 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi558g00005 Sebi-Chr558 41210 48280 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi558g00005 35 420 Amino Acid or Auxin Permease AAAP Family AT3G28960 52.713 1.12e-146 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi558g00005 K15015 - gmx:100784690 651.358