Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi558g00001 ATGTGTGGTTGTGTTGTGGGTAATTTTGGATGTGCTGAAGTGCATGACATGGGTATTGGTACTCAGACACAAGAGGCATGCATTTACAATGATGGAAATGGAAATGTGGCATGTCACACTTATGGGTTCAGTGCATGCGAAGAAGAGGCAGATTCTGATTATGTTGAAGAGGAAGACACAGAGTGTAGTGCTGAAGGGTCAGAAAATGGTGAAGATGACAACAATAGTTCTGAAGAAGATGTAGATTATACAGATGCAAGTGAGGAGGACAATGGCCTGCATGAAGAACCATGTGTGGAGGACAATTCCATCCATGAGAGGGTTGCTCATGTTGATGAAAGTAATGAGGTAGCTGTTGACGATGAGGAGGATATGGGGAATATTGAATTCAAGACATTAACATTGAATGATCTTATGTCTTTTCACTTTTCGAACCTGGAAGTGGCATTTATCTTTTATCGTTGGTTTGCAAGATTCAAAGGTTTTGCAGCTCGGAAGGACCGGACAGTGAAAAACAAGCAGAAGGAAGTGATACAACAAACATTTGTTTGTTATAGGGAAGGTGGAAAGACACGAAATCATAGTGTTCTGAAACGGCCTCCACGCAAGAGTCTGACGACGCGATGTATTGGAGACACAACTGATAATGAGGGGAGGCTGAAGAACCTTTTTTGGTGTGATGGTCATTGTCAGAAGGACTATTTACTTTTTGGGGATGTTCTTGCATTTGATGCGATTTACAAGAAGAACAAATACAGTTGTCTGATGGTTGTCTTCTCCGGGGTAAATCATCATAACCAAACCATTGTTTTTGGTATTGCAATGGTTTCCAACGAGACAAAGGAAACATATGTTTGGGTTCTGGAACAATTACTGCATGCTATGAAAGGGAAGATGCATATATCAGTCATAACCGATGGGGACCATGCCATGAGGAATGCCATCAGAAGAGTATTTCCCAGGGCCCATCACAGGTTATGTGCTTGGCATCTAATTCGAAATGCTACAACCAATGTGAAGAACCCTCAATTCACTTCTATATTTGAAGACTGCATGTTGCGTGAATATGAGATTTCAGAATTTGAGATTAAGTGGGGGGACATGGTCAATGCTTGTGGGGTTCAGGATAACATGTGGGTTAGACAATTGTATGAAAAGAAGATTATGTGGGCCATTGCTTACATAAAGGGGAATTTTTTTGCTGGATTTAGGACTATATCTCGTGTAGAGGGGTTACATGCATTGCTAGGAAAATTTGTTAATAGCCGGCATAATTTGACTGAGTTCTTAGAGCATCATCAGCGTTGCCTTTTGCAAATGCGATTTAGAGAAGTGGAATCGAATTTTGATTCAATACATGGGGAGCAGGAGTTGCAGACTCAATTGAGGAGCTTAGAAACAGATGCTGTAAAGGTCTACACTAAAGAAATATTTTTCATGTTCAGGCAGGTGGTCCAAAGTGCTAGTAGGGTGAGGGTCACAGGTGAAAAACGTATCAAAAATGGGTTCATTTACTTTGTAACCAAATACCGAAGGGCGGACAAAGAGTGGCATATCTCCTTTTGGCCCTCAAATACTGAATTCAAGTGTTCTTGTCAGAGAATGGAGTCTTTAGGTATCCCTTGTGATCAAATTGTTGGTGTAATGGTTTTTTTAGACATGGTTGAAATCCCGCAGTCACTTATACTAAATAGGACTAGTAAGGATTTTTCCGAAGTAATGACTATCTTTAAAAATGAAAGTGAGACTCGGGAGGCCAATCAGCGGAGGCCTAGTTGCAATGTTCGCAATGAGGAAGATGTGATTACAGGAAATATTAAGAACCCTACTGTTGTAAGGACGAAGGGTTGCAGAGGTGGTGGCTCTATAGGAAATTGTCCAAGTAGGAGGACCTTACATTGTAGTGCATGTGGCCTTGTTGGTCACAACCAGCAAACTTGTTTAAGGAGAAGGATGGTGGACGAAGAAGGCATGGCCACAGAAGGAGCTGCTGTTGACTG 2000 0.4155 MCGCVVGNFGCAEVHDMGIGTQTQEACIYNDGNGNVACHTYGFSACEEEADSDYVEEEDTECSAEGSENGEDDNNSSEEDVDYTDASEEDNGLHEEPCVEDNSIHERVAHVDESNEVAVDDEEDMGNIEFKTLTLNDLMSFHFSNLEVAFIFYRWFARFKGFAARKDRTVKNKQKEVIQQTFVCYREGGKTRNHSVLKRPPRKSLTTRCIGDTTDNEGRLKNLFWCDGHCQKDYLLFGDVLAFDAIYKKNKYSCLMVVFSGVNHHNQTIVFGIAMVSNETKETYVWVLEQLLHAMKGKMHISVITDGDHAMRNAIRRVFPRAHHRLCAWHLIRNATTNVKNPQFTSIFEDCMLREYEISEFEIKWGDMVNACGVQDNMWVRQLYEKKIMWAIAYIKGNFFAGFRTISRVEGLHALLGKFVNSRHNLTEFLEHHQRCLLQMRFREVESNFDSIHGEQELQTQLRSLETDAVKVYTKEIFFMFRQVVQSASRVRVTGEKRIKNGFIYFVTKYRRADKEWHISFWPSNTEFKCSCQRMESLGIPCDQIVGVMVFLDMVEIPQSLILNRTSKDFSEVMTIFKNESETREANQRRPSCNVRNEEDVITGNIKNPTVVRTKGCRGGGSIGNCPSRRTLHCSACGLVGHNQQTCLRRRMVDEEGMATEGAAVD 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi558g00001 666 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 128 583 IPR031052 GO:0006355
Sebi558g00001 666 Pfam MULE transposase domain 240 334 IPR018289 -
Sebi558g00001 666 MobiDBLite consensus disorder prediction 49 86 - -
Sebi558g00001 666 MobiDBLite consensus disorder prediction 49 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi558g00001 Sebi-Chr558 1576 4243 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi558g00001 MULE 1.9e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi558g00001 - - tpra:123905832 482.256