Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi557g00031 ATGGGTTTCTCCCAAGGAACTTGCACTGATTCCAGGGACCTTTCCAATGCCCAAAGCGCTCTTCCTCCATATGCTTCCACTTACAGTGACTACAACAAACTCAAATTTCGAACCTTTTTGAGGAAAATGATCTGGGAGTTTGGTTTTGCGTGTGTTGGCAACCCTTCCCGTAACCGGGGTAACTCCGAGAGAAACCTGGGTCATAGCGAAAACGACGGCAAAAAGATGAGTTTAGAACACAACAAGGCTTGGTTGCTTGCGGAGTCTGGTGGGTGTGGTGGAGCAGAATTGACCAATGCTGACCCTCAATCGGTTCACTCTTCTTTTAGGTTCAGCTTCTGTTCTCAGGTGGAGTTGGAGTCCTTGAACATGAGTTCTTCCTCTGCTGCTACCGTTTTGATGGTGAATTTGGACAATGGGGTGAGTGAATCTCGTGCTAAGGAACTCAAATGGAGGAGAATGGAGTCATTGGAGAAGAGCATTTCCCCTGTTGCTCACTCTTTGATCAGGTTCAGCTATGGTGAAATTCTATCTGCTACTCGGAATTTCTCCAAAGGTAGGGTGTTGGGAAGAGGGGCATTGAGCTGTGTTTTTAGGGGAAGAGTAGGGCTTTTTAGAAATGCTGTAGCAATTAAACAGTTGGACAAGGAAGACAAGGAGTCTGCCAAGGCCTTTTGTAGAGAATTGATGATTGCTAGCTCTCTTCATAGCCCAAACGTTGTTCCCCTTGTGGGTTTTTGTATTGACCCGGAGGAGGGTTTGTTTTTGGTTTACAAGTATGTCTCAGGGGGCAGCTTGGAGCGCCACTTGCATGGGAGGAAGAAGGGTGGGAAGGGTAGTTCACCACTTCCATGGTCTGTGAGGTACAAAGTTGCAGTTGGGATTGCAGAAGCTGTGGCTTATCTGCATAATGGAACTGAAAGATGTGTTGTTCATAGAGACATTAAGCCCTCAAACATTCTGCTTTCTTCTAAGAAGACTCCAAAGCTATGTGATTTCGGATTAGCTACATGGACTTCTGCACCTTCAGTTCCTTTCCTTTGCAAAACTGTCAAAGGAACATTTGGATATTTGGCTCCTGAATATTTCCAACATGGGAAAGTATCAGATAAGACTGATGTTTATGCTTTTGGAGTGGTTTTATTGGAACTCATTACTGGCCGGAAGCCAATTGAAGCGAGAAGGTCTCCCGGAGAGGAGAACTTGGTCTTATGGGCTAAACCTTTTCTACAGAAAGGGAAAGGAGCCATAGAAGAGTTGCTTGATCCTCAACTGAAGTGCAGTTTGAAATTCTCAAATCAAATGGGTAGAATGATTGAAGCAGCAGCTGCCTGTGTCACAAATGAAGAATCTAGGAGACCTGGCATACATGAGATTATTGCAATACTGAAAGGTGAAGAAGAACCTATTTTCTCTAAAAGAAAGAAGTCCAGTTTTCTTGGGAATGGCTGTGTGATTGATTGTTATTCTCAATTACAACAAACAAATAATGAGATGAAAAGTCACTTGGCTTTGGCAATGCTAGGAGTTTCAGAGTTTGAGGATGATGATTATCTCTATGATCGTTAA 1569 0.4379 MGFSQGTCTDSRDLSNAQSALPPYASTYSDYNKLKFRTFLRKMIWEFGFACVGNPSRNRGNSERNLGHSENDGKKMSLEHNKAWLLAESGGCGGAELTNADPQSVHSSFRFSFCSQVELESLNMSSSSAATVLMVNLDNGVSESRAKELKWRRMESLEKSISPVAHSLIRFSYGEILSATRNFSKGRVLGRGALSCVFRGRVGLFRNAVAIKQLDKEDKESAKAFCRELMIASSLHSPNVVPLVGFCIDPEEGLFLVYKYVSGGSLERHLHGRKKGGKGSSPLPWSVRYKVAVGIAEAVAYLHNGTERCVVHRDIKPSNILLSSKKTPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEARRSPGEENLVLWAKPFLQKGKGAIEELLDPQLKCSLKFSNQMGRMIEAAAACVTNEESRRPGIHEIIAILKGEEEPIFSKRKKSSFLGNGCVIDCYSQLQQTNNEMKSHLALAMLGVSEFEDDDYLYDR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi557g00031 522 SUPERFAMILY Protein kinase-like (PK-like) 170 468 IPR011009 -
Sebi557g00031 522 ProSiteProfiles Protein kinase domain profile. 183 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi557g00031 522 PANTHER OS08G0249100 PROTEIN 126 478 IPR046958 -
Sebi557g00031 522 Pfam Protein kinase domain 184 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi557g00031 522 Gene3D Transferase(Phosphotransferase) domain 1 261 479 - -
Sebi557g00031 522 FunFam Putative receptor-like serine/threonine-protein kinase 261 479 - -
Sebi557g00031 522 FunFam probable serine/threonine-protein kinase PBL7 144 260 - -
Sebi557g00031 522 Gene3D Phosphorylase Kinase; domain 1 167 260 - -
Sebi557g00031 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Sebi557g00031 522 SMART serkin_6 183 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi557g00031 Sebi-Chr557 501536 504284 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi557g00031 171 466 Trihelix Transcription Factor Family AT1G70460 42.617 1.06e-68 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Sebi557g00031 Pkinase 4.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi557g00031 - - gmx:100786826 900.968