Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi557g00022 ATGGATAACTTGTTGGGGCTGCTCAGAATTCATGTTGAAAGAGGGGTCAATCTTGCTATCAGGGATGTAGTGAGCAGCGACCCTTATGTTGTCATCAAAATGGGAAAGCAGAAGCTGAAGACTCGGGTAGTGAAGAAGAATCTAAATCCTGAATGGAATGATGACTTGACTTTATCCATTTCAGATCCTCATGCTCCAATCCAGCTATTTGTGTATGACAAGGACACATTTAGCTTGGATGATAAAATGGGGGATGCTGAGTTTGTGATTGGTCCATTTGTTGAAGCAGTAAAGATGCGCTTGGAAGGTCTCCCTAATGGTACTATAGTTACAAGAGTGCAACCTAGCCGACAAAACTGCTTAGCAGAAGAGAGTAAAATTGTCTGGAAGGATGGCAAAGTGATCCAAAACATGGTTCTTAGGCTAAGAAATGTTGAGTGTGGGGAAGTGGAGCTCCAGTTGTGTTGGATTGACATTCCTGGTTCAAGGGGTATTTAG 498 0.4277 MDNLLGLLRIHVERGVNLAIRDVVSSDPYVVIKMGKQKLKTRVVKKNLNPEWNDDLTLSISDPHAPIQLFVYDKDTFSLDDKMGDAEFVIGPFVEAVKMRLEGLPNGTIVTRVQPSRQNCLAEESKIVWKDGKVIQNMVLRLRNVECGEVELQLCWIDIPGSRGI 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi557g00022 165 Pfam C2 domain 6 90 IPR000008 -
Sebi557g00022 165 CDD C2_ArfGAP 5 148 - -
Sebi557g00022 165 Gene3D C2 domain 4 163 IPR035892 -
Sebi557g00022 165 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Sebi557g00022 165 SMART C2_3c 7 102 IPR000008 -
Sebi557g00022 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 91 IPR035892 -
Sebi557g00022 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 163 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi557g00022 Sebi-Chr557 413019 414566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi557g00022 38 165 C2H2 Transcription Factor Family AT1G70790 60.000 4.55e-52 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi557g00022 - - gmx:100793531 293.508