Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi557g00018 ATGAAGAGGGATCACCAAGATAGTTGTGGTGGAGGAGGTGGTTCTAGCTACGGGAGTGGGAAGAGCAGCGTCGGTGGCGTGAAAGGTGAATGCTCGTCAATGCCGAACGGAAAGGCGAAGATGTGGGAGGATGAACACGACTCCGGTGCCACCGCCGGCGGAGGAATGGATGAGCTACTAGCGGCGTTGGGGTACAAGGTGCGTTCCTCCGACATGGCTGACGTGGCGCAGAAGCTTGAGCAGCTTGAGATGGTGATGGGAAGTGCTCAAGAAGATGGAATTTCACACCTTGCTTCTGATACGGTTCACTACGACCCAACGGATCTCTATTCATGGGTTCAAAACATGATCACCGAACTCAACCCTGCCCCACTCGATCCATCTTCCCTCTTGGAAAACCCCCAAATCAACGACTCTTTAGACCCTTCTTCCATCCTCAACAACAACAGTTCAAGGGTCTTCAACGATGACTCAGAATACGACCTCAGAGCAATCCCTGGCATAGCCGCATACCCACAACAACAGCAAAACCAAACCAATAACAACGAAGAAATCGAGCCCGGTAACAAGCGATTGAAGACATGGGGAATGGAATCACCCGATTCGGTGGTGTCTCCGCCGCCGACGCAGGCGGCAGCGGCGGCCGCGCCGGCACCTGAACCAACTAGGCCGGTGGTTCTGGTTGACTCACAGGAAACAGGGGTTCGTCTTGTGCACACTATGATGGCTTGTGCTGAAGCGATTCAACAAGAGAATCTGAAGCTCGCGGATACGCTGGTGAAGCACATAGGGTTGCTCGCGGCGTCGCAAGCCGGAGCGATGAGGAAGGAAACCATGGATTCATCTTTCTCCGATGTGCTTCACATGCACTTCTACGAATCCTGCCCTTACCTGAAATTCGCGCACTTCACCGCCAACCAGGCTATTCTAGAAGCTTTTGCCTCCGCCGGCAGGGTCCACGTCATCGATTTTGGCCTGAAACAGGGGATGCAGTGGCCGGCGCTAATGCAAGCCCTCGCATTGCGCCCCGGTGGCCCCCCAACTTTCCGGCTAACCGGAATCGGACCGCCGCAGAACGACAACACCGATGCACTCCAACAGGTTGGTTGGAAGCTCGCTCAGCTTGCTCAAACCATTGGTGTTCAGTTCGAATTTCGTGGATTCGTCTGTAACAGCCTCGCGGATCTTGACCCGAACATGCTCGAGATCCGACCCGGTGAAGCAGTTGCAGTTAACTCCGTCTTTGAACTCCACCGCATGCTAGCCCGACCCGGATCCGTTGACAAGGTTCTCAACACCGTGAAAAAGCTTAAACCCAAGATTGTTACTATCGTTGAGCAAGAAGCGAACCATAACGGACCGGTTTTCGTTGACCGGTTCACGGAGGCACTGCATTATTACTCGAGTTTGTTTGACTCACTGGAAGGTGCGTCCTCGAACGGGTCCGTTTCACCGAGTCAGGACCTGCTGATGTCTGAGTTGTACCTGGGGAGACAGATTTGCAACGTGGTGGCGTGTGAAGGTGTGGACCGGGTCGAGAGGCATGAGACGCTGAGTCAGTGGAGGGGGAGAATGGGTTCGGCCGGGGTGGAGGAGAATAATGGGTGTCTCATGCTTGGGTGGCACACGAGGCCACTCATCGCCACCTCGGCGTGGAAGCTCCCACCCGGTGAGTCGTAG 1680 0.55 MKRDHQDSCGGGGGSSYGSGKSSVGGVKGECSSMPNGKAKMWEDEHDSGATAGGGMDELLAALGYKVRSSDMADVAQKLEQLEMVMGSAQEDGISHLASDTVHYDPTDLYSWVQNMITELNPAPLDPSSLLENPQINDSLDPSSILNNNSSRVFNDDSEYDLRAIPGIAAYPQQQQNQTNNNEEIEPGNKRLKTWGMESPDSVVSPPPTQAAAAAAPAPEPTRPVVLVDSQETGVRLVHTMMACAEAIQQENLKLADTLVKHIGLLAASQAGAMRKETMDSSFSDVLHMHFYESCPYLKFAHFTANQAILEAFASAGRVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQNDNTDALQQVGWKLAQLAQTIGVQFEFRGFVCNSLADLDPNMLEIRPGEAVAVNSVFELHRMLARPGSVDKVLNTVKKLKPKIVTIVEQEANHNGPVFVDRFTEALHYYSSLFDSLEGASSNGSVSPSQDLLMSELYLGRQICNVVACEGVDRVERHETLSQWRGRMGSAGVEENNGCLMLGWHTRPLIATSAWKLPPGES 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi557g00018 559 Gene3D - 55 120 IPR038088 -
Sebi557g00018 559 SMART DELLA_2 57 130 - -
Sebi557g00018 559 Coils Coil 72 92 - -
Sebi557g00018 559 ProSiteProfiles GRAS family profile. 228 559 IPR005202 -
Sebi557g00018 559 Pfam Transcriptional regulator DELLA protein N terminal 57 124 IPR021914 -
Sebi557g00018 559 MobiDBLite consensus disorder prediction 1 50 - -
Sebi557g00018 559 FunFam DELLA protein GAI 55 120 - -
Sebi557g00018 559 MobiDBLite consensus disorder prediction 192 221 - -
Sebi557g00018 559 Pfam GRAS domain family 285 531 IPR005202 -
Sebi557g00018 559 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 187 531 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi557g00018 Sebi-Chr557 357975 359797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi557g00018 1 554 GRAS Transcription Factor Family AT2G01570 55.916 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi557g00018 GRAS 4.5e-100 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi557g00018 K14494 - gmx:100799695 805.438