Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi556g00021 ATGGACTCTCATGGAACATCCTGGGCTGACCAGTGGGACGATGGCCCAGACCATGTGAGTGGTTCCAATCAATCCAAGAAGAAGAGCAACAACGTCCTCGGCAAAACCAAGACAGTGGCTTCCACTGGCGTCAAGAAGTTGAAGGAGGGCACTTCTATCGGAGCCGTTGTGCACAAAGGTGGTGAGTTGAGTTCGATTCAAGTGTGTGAGAAGCACTGGGTTGATGAGGGAACCATTCATTTCGATGATGAAGATGGTGCAGGTCAAAGTGAGTACACTTGTGTAGGAATGAGTATCAATGATTTGGATGATGTGCGGAAAATAGATATGAAGAGCATTAGTTGTGAAGAGGTTAGTAAATGTGAATTTGCGGAGGTGGAACTTGGTTATCTGTTTTACTGTAAGTATGCAATGAAGAAGGGTTTTACTGTCAAAAAAGGAAAGGTGGTTAGGAACACAAGAGGTGAAATTGTGCAGCAGACATTGTTTTGTAACAGGGAAGGGAAAAGACAAAGCATAAATCTAAAAGAGTGTGAACCAAGACCTAAAACCAGATGTGGCTGCTTTGCCTTTTTATCTCTTCGTATTTACTTCAACTCTGGACGATGGTTTGTGAAAGACTTCAACGATGATCACAATCGGGATATGCTAGAAGAAAAGTATTGTCGAATGATGCCTTCTCACAGGAAAATGGTTGAATCTGATGTAATGGTTGGTTTTCGGAAAAAGGATATGTACAACAAAATAGACAAACAAAGGCGGTTTCAATCATCTGATGCAAAGTCTGTTCTAAAGTACCTACGCCAAATGCGAAAGCATGATCCTCTAATGAGCTTCATACACATGGTTGATGACGAAAATAGGTTGCAACACCTTTTTTGGTCTGATGGGATTTCTCAGTTAAATTACCAACTTTTTGGTGATGTCTTAGTATTTGATGCAACATATGGAGGAATAAGTATCGGTGTCCGTTGGTGGACAAATATGGTGACTAAGTTTCATTTGGAGGAGAACAATTGGATGAATGATCTGTTGGATAAGAAGCACATGTGGGCTACTGCATACATAACAGAACAGTTTTTTGCTAGTTTGAGAACCACATCTCGATGTGAGAGCTTACATGGTCAACTTGGGGAGTTTATAAAATCTCGCTACAACCTTATAGAGTTTGTTCAACACTTTCAACGTTGTCTTTGCTACATGCGATATAAAGAAGAAGAGGAGGACGACTTTGCATGGAGTCAGCCATGTGGAACATTTACACAGTTAAAAGGTACCAAAGTGGCGGGAAAGAATGGGGAAATGGATGGTAATTTACAGGATCCGGTACGAGTTAGAACAAAAGGTTGTGTTCACTCTAATACAAGTGCATCTAATAAAGGGAGGAGAAAGAACAAGTGCAGCCAATGTGGAGGAGTAGGACATAACAAAAAATGTTGTCCTAAACAATGTGCTGCAATGGGTGCTGCTAGCACTCTGCAGCTGGTGGAACTCAAGATGGAAGTCAGCCTAACTTCAGTCTCTATGTGGATTTGGTATCAATTTGGCTCACCATTAACTCAGCAGACCCAAAATTATTCAGAGGGAATGGAACATGAAGATGTGGAACAGCCTGATGGTGTTGCTGCTAACTTCTGCATTACAATGAATGTTACATCCATATTTTATTGTGGACACAACAGGTCAATAGGAATGCTTGGACAGGAGAGTGTGGTTGTTGTGACTAGAAGCAATTATGGAGGTGATTTCGGAATATATTGTTGTCATCGTTGGCTGAGTTGGACCAATATTATCTAG 1797 0.4129 MDSHGTSWADQWDDGPDHVSGSNQSKKKSNNVLGKTKTVASTGVKKLKEGTSIGAVVHKGGELSSIQVCEKHWVDEGTIHFDDEDGAGQSEYTCVGMSINDLDDVRKIDMKSISCEEVSKCEFAEVELGYLFYCKYAMKKGFTVKKGKVVRNTRGEIVQQTLFCNREGKRQSINLKECEPRPKTRCGCFAFLSLRIYFNSGRWFVKDFNDDHNRDMLEEKYCRMMPSHRKMVESDVMVGFRKKDMYNKIDKQRRFQSSDAKSVLKYLRQMRKHDPLMSFIHMVDDENRLQHLFWSDGISQLNYQLFGDVLVFDATYGGISIGVRWWTNMVTKFHLEENNWMNDLLDKKHMWATAYITEQFFASLRTTSRCESLHGQLGEFIKSRYNLIEFVQHFQRCLCYMRYKEEEEDDFAWSQPCGTFTQLKGTKVAGKNGEMDGNLQDPVRVRTKGCVHSNTSASNKGRRKNKCSQCGGVGHNKKCCPKQCAAMGAASTLQLVELKMEVSLTSVSMWIWYQFGSPLTQQTQNYSEGMEHEDVEQPDGVAANFCITMNVTSIFYCGHNRSIGMLGQESVVVVTRSNYGGDFGIYCCHRWLSWTNII 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi556g00021 598 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 115 316 IPR031052 GO:0006355
Sebi556g00021 598 MobiDBLite consensus disorder prediction 17 33 - -
Sebi556g00021 598 MobiDBLite consensus disorder prediction 1 33 - -
Sebi556g00021 598 Pfam FAR1 DNA-binding domain 132 216 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi556g00021 Sebi-Chr556 268882 272976 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi556g00021 FAR1 2.7e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi556g00021 - - tpra:123913749 217.624