Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi556g00015 ATGCATAGTCTGAGAATGCTCCAATTCTACAAGTCTTCTGGCTTTTGGGAACAATCAAATGTGATCCTTCCTGCATTTCTTGAAAGTCTTCCGGATAATTTAAAATTTCTTCGTTGGGATGGCTTTCCTCAAAGAACTTTGCCGCTGGATTTTTGCCCAGAAAATCTTGTTAAACTTGATATGCGTAATAGCCATCTTGAACAACTTTGGGAGAGAGATCAGGATTTACCGAATTTGAAAAGCCTCAATCTTAGTTTTTCTCGGAAGCTGATTCGAATACCAGACCTCTCTCTATCTCCAAATATTGAAGAAATAATTCTTAGTCATTGTGAAAGCTTGGTTCAAGTTTACTCTTCGAGATTCCTCAGAAAACTCAACTGTTTATTTTTAGATGGTTGTGTTGAGCTTAGGGATTTAAACCTTCCTAGCAACATTCTATCGGGATCTTCTGGATTAGTTGTTCTATGTAAGTGTTGCAAACTTGAAACATTTTCAATCAGCAGTAGAACTGAGGCGGTTCAATCATACAATTGTTTGCAATTGCATTGTGATGGATTCTGGGGAGCAGTTGAAATTTTCCGTGAAGCAAAAGTTAACGCAAAAGTTAACCTATATAATGGAAATCTTATCCAGTTCAATCGAAAAGGTGGCATGAGATATTCTTCAGATACTTTTGACCCCATTATGTGTGCTGACAGATATGAAAAAAAAGAAGTGGCAGATAATGTACGCTTACTAAACATGAAAGTGATGATAGAAACTATGCCTTCACTATTTCCAAGTCTCAATGAGCTTTGTTGGTTAGATATATCTGATTGTGAATCCCTTACAAGCCTTCCAATTGACCTTTGTAAGTTGAAATTTCTAAGAAGACTTTATCTCCGTGGTTGCTCAAATTTGGAAAATTTCCCTGAAATCAAGGAGACAATGGAAAATTTAACGGTGCTCATCTTAGATGAAACAGCAATAAAGGAGCTACCTTCATCCTTGCACCATTTGGTAGGGCTTGAAGTATTGAGCTTGCATAATTGCTCGAGGCTTGAGATTATTCCATCTTCCATTGGAAGTCTCAGCAAACTCTGCAAGTTAGACCTTACTTGCTGTGAATCACTTGAGACTTTTCCAAGCAGCATTTTCAAATTGAAGTTAACAAAACTTGATTTGCGTGGTTGCACAATGCTAAAGAGCTTCCCAGAGATCTTGGAGCCTGCAGAAAGTTTTGCTCAAATTAGCTTAACAAAAACAGCAATTAAAGAACTACCTTCATCATTGGACTATTTGGCTGGGCTTGGAACCTTGCGTCTGAACCTATGCAGTGATCTGGAGTCACTTCCAAATAGCATTGTTAATCTAAACCATCTCTCTGAGCTTGATTGTTCAGGCTGTGGCAAATTAACAGAAATCCCAAATGATATAGGTCGCATGTCATCATTAAAAGAATTTTCACTGCAAGGAAGCAGTATTGTGAACCTTCCTGAGAGTATTGCTCTTCTTTCAAGCTTGAAATCACTTGATTTAAGTGATTGCAAAAAGCTTGAATGTATCCCACAACTTCCACTATTTCTGAAACAGTTATTGGCGCTTGATTGCCCATCCATTAGAAGAGTGGTGTCAAATTTAAGGTTTGAACTCCCATCAGATTCCAAAGAGGGTACCTTTAAATTTCATTTCACCAATAGTGAAGAACTTGATCCAAGTGCTCAAAGTAATATTATGGCTGATGCATGGCTTAGGATCACTGATGATGCATATAGGTCTGTGTTCTTTTGTTTTCCAGGAAGTACAGTTCCTCATTGGTTCCCTTATCGCTGTGGGGGACGTTCAATAACTGTGAATAAGGATTCTCTAAATTGGTGCAATGAAAATAGGCTCATTGGTTTCGCCCTATGTGTCGTTTTGGGACTTAAAGATATGGATGATACAGAACGAAGATGTGGATCTGGTGTTTTTAGATGCAGATTAACATTTGAATATGATGGTTGGAAAAACAGTCTTCCCAACCATGATGAGCTAAGAGACTATTTCTATTGGAAGGGTCGAGAGAGAATCAGAAGTACTCCGAATGGTTATGACATTTCCATTGGTCCACCATGTCTGTATAGGTTGACTTGCTTTGTTCTCTCCTTAACCACAGTTTCCTCAAACCGTTACAATTTTGGCTCCATAAACTTTCAAGCATCAAGACAGGATGTCGCCAAATTTGGTGGTTTGCAATACAGCAAGGGCAATATCAATTCTTGA 2241 0.3833 MHSLRMLQFYKSSGFWEQSNVILPAFLESLPDNLKFLRWDGFPQRTLPLDFCPENLVKLDMRNSHLEQLWERDQDLPNLKSLNLSFSRKLIRIPDLSLSPNIEEIILSHCESLVQVYSSRFLRKLNCLFLDGCVELRDLNLPSNILSGSSGLVVLCKCCKLETFSISSRTEAVQSYNCLQLHCDGFWGAVEIFREAKVNAKVNLYNGNLIQFNRKGGMRYSSDTFDPIMCADRYEKKEVADNVRLLNMKVMIETMPSLFPSLNELCWLDISDCESLTSLPIDLCKLKFLRRLYLRGCSNLENFPEIKETMENLTVLILDETAIKELPSSLHHLVGLEVLSLHNCSRLEIIPSSIGSLSKLCKLDLTCCESLETFPSSIFKLKLTKLDLRGCTMLKSFPEILEPAESFAQISLTKTAIKELPSSLDYLAGLGTLRLNLCSDLESLPNSIVNLNHLSELDCSGCGKLTEIPNDIGRMSSLKEFSLQGSSIVNLPESIALLSSLKSLDLSDCKKLECIPQLPLFLKQLLALDCPSIRRVVSNLRFELPSDSKEGTFKFHFTNSEELDPSAQSNIMADAWLRITDDAYRSVFFCFPGSTVPHWFPYRCGGRSITVNKDSLNWCNENRLIGFALCVVLGLKDMDDTERRCGSGVFRCRLTFEYDGWKNSLPNHDELRDYFYWKGRERIRSTPNGYDISIGPPCLYRLTCFVLSLTTVSSNRYNFGSINFQASRQDVAKFGGLQYSKGNINS 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi556g00015 746 Gene3D Ribonuclease Inhibitor 241 382 IPR032675 -
Sebi556g00015 746 SUPERFAMILY L domain-like 250 533 - -
Sebi556g00015 746 Pfam Leucine Rich Repeat 55 74 IPR011713 -
Sebi556g00015 746 Pfam C-JID domain 591 672 IPR045344 -
Sebi556g00015 746 SUPERFAMILY RNI-like 34 319 - -
Sebi556g00015 746 Gene3D Ribonuclease Inhibitor 6 201 IPR032675 -
Sebi556g00015 746 PANTHER LEUCINE-RICH REPEAT-CONTAINING 310 462 - -
Sebi556g00015 746 Gene3D Ribonuclease Inhibitor 383 541 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi556g00015 Sebi-Chr556 173222 176120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi556g00015 330 511 WRKY Transcription Factor Family AT4G12020 35.714 8.13e-18 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi556g00015 - - lja:Lj4g3v3113360.1 1015.76