Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi556g00014 ATGGAAAGTGATGCTAAGGGATGTGAGGTCATTGTCAGTGGAAAATTGAGAGCCCAGAGGGCCAAATCCATGAAGTTCAAGGATGGGTACATGATTTCTTCTGGGCAACCAGTCAAGGATTACATTGACTCTGCAGTGAGGCATGTGCTCCTCAGACAGGGTGTTCTTGGTATCAAGGTGAAGATCATGCTTGATCGGGATCCTAAAGGGAAACAGGGTCCTAAAACGCCCCTCCCTGATATTGTCACAATCCATGCTCCAAAAGAGGAAGAAGAATACACCCAGTCTGCTGCTGTTTTGTCAACTGATATTGAGGTCCCTGTCGCTTGA 330 0.4697 MESDAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIMLDRDPKGKQGPKTPLPDIVTIHAPKEEEEYTQSAAVLSTDIEVPVA 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi556g00014 109 Gene3D - 1 94 IPR036419 -
Sebi556g00014 109 SUPERFAMILY Ribosomal protein S3 C-terminal domain 1 65 IPR036419 -
Sebi556g00014 109 ProSitePatterns Ribosomal protein S3 signature. 21 57 IPR018280 -
Sebi556g00014 109 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 1 76 - -
Sebi556g00014 109 Pfam Ribosomal protein S3, C-terminal domain 1 62 IPR001351 GO:0003735|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi556g00014 Sebi-Chr556 164130 164669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi556g00014 1 109 Cytoplasmic Ribosomal Protein Gene Family AT5G35530 76.147 7.43e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi556g00014 K02985 - gmx:100795581 201.83