Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi556g00006 ATGGCAGCCGCCGGCGATGTTCTCAGGCAGAGTTTCCCGGAAGTGAGTTCAGGGGAACTTCACGTGCTTGCTGTTGATGACAGCCACGTGGACCGTAAGGTCATTGAACGGTTGCTCAAAATCTCATCTTGCAAAGTGACGGTGGTAGAGAGTGGAACCAGAGCTCTACAGTATCTTGGGTTGGATGGGGATAAGAGTTCCATTGATATTGATACTGTGAAGGTTAATCTGATAATGACAGATTATTCCATGCCAGGGATGACTGGATACGAACTACTCAAAAGGATAAAGGAGTCATCTGTTTTCAGAGAGATTCCGGTGGTGGTTATGTCCTCTGAGAATATCTTGACCCGAATTGATAGTTGCTTGGAGGAAGGAGCAGAGGAGTTTCTGTTGAAGCCTGTAAAGTTGTCTGATGTAAAAAGGTTAACAAATTTCATCATGAGAGGTGAAGGAAAGAAGGGAGAAAAAAGATCTCAAAAAAGAAGCCGATCAGAGGATTGCAATCCATCTCTATCATCATTGTCCTCCAAGAAGTCTAGATTGTGA 549 0.4408 MAAAGDVLRQSFPEVSSGELHVLAVDDSHVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGDKSSIDIDTVKVNLIMTDYSMPGMTGYELLKRIKESSVFREIPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRLTNFIMRGEGKKGEKRSQKRSRSEDCNPSLSSLSSKKSRL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi556g00006 182 MobiDBLite consensus disorder prediction 166 182 - -
Sebi556g00006 182 Pfam Response regulator receiver domain 22 141 IPR001789 GO:0000160
Sebi556g00006 182 CDD REC_typeA_ARR 22 143 - -
Sebi556g00006 182 Gene3D - 20 181 - -
Sebi556g00006 182 SMART REC_2 20 144 IPR001789 GO:0000160
Sebi556g00006 182 MobiDBLite consensus disorder prediction 151 165 - -
Sebi556g00006 182 SUPERFAMILY CheY-like 19 149 IPR011006 -
Sebi556g00006 182 MobiDBLite consensus disorder prediction 151 182 - -
Sebi556g00006 182 ProSiteProfiles Response regulatory domain profile. 21 148 IPR001789 GO:0000160
Sebi556g00006 182 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 174 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi556g00006 Sebi-Chr556 71425 73687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi556g00006 6 179 Response Regulator Gene Family AT5G62920 66.286 3.05e-75 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi556g00006 Response_reg 5.3e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi556g00006 K14492 - gmx:100306152 288.5