Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi555g00021 ATGAATGCGTTTCTTGATTCTATATCAGGAGATGCACGTGCAGCACGTCACAGTGTCGTGAAGGAATCTATTGCTGATGTTTTGAGAGCATTATTGTGGATTCTTCAATGCAAAAATGGGCCCTTGTTAAGCATGGCATCGAATGTGGCATTGAAGTTAGTTAGCGTTTTACCAAATCCACTATTGCAATCGCATTTGTTGGACCTTGTCTATTGTCTATCATCCTTGCTATCTTCGCATCAAGTAGAAGTTGCAATACCCTGTGCTACTGCTTTAAATTTGGTAATCTCAAATTTAAGTGCCACAAGTGAGAGGGCCGTTATGGAAGCATTGAAAGAAACGGATATTTCCATTCGAATTGTTGGAAATATAAAAGATTTTGCTATAGCTGCGAAGAAAATTGAATATTTTGAAGAGATGGCCTCACTTTTGAGCACAATACTGTTGCGGTGGCCTTCGTCTAGGTTCCCTGTTTTTAATGATGTTGAATTTATGAATGGTTTAGCAAACATGCATACAAGGATGGATAGTTCTATTCAACCCGTACTTTTAAAACTGTATACATCTTTAGCTTTATGTGATTCTATAGCAAAGAAACTTATAGAGGATGGAAAAGTATTTCTACAAATGGTTGTGCAGGCAATGGGAAAATCAAATCCTTATGATGTTCGGATAGAAGGGTTTAGGCTTGCTCAATGTTTATTGAGATCCCAAGAGAATTGTTTAAAAGTGGTGGATTTATGTGGTGAAGCTCTTGTTGATGCCATAGTTTGTGGGATGAGAGAAACAGGGCTTAGTTCCAATAAAAATGGGAACAACCATGGTTCTTTGTTAATGGAAGCTTGTCGATTGGCTCTAATAACTCGATGGGCTGGTGATCATCATATAATTTTTTGGAAACAAGGAATTGATAGAGTCCTCCTTAATCTTCTGTTTGAAAATATTCAAGACCAATCGTCTGAACTTATCTTGTCATTGGAAAAACAAATATCCATGGTGAAGGAGGGATTGAAAGCCAATTATCATCTTGGTCTAAGGAGTTATTTGTGGGACATTCTTGGGTTGCTTACAATTCATTGTGGAGAAAATTTTAACCCTTATTCCCATGGAAGTGAGCTCCACATCAACTTACTAATTATGTGTGCATGCTTGACTTTTGTGGATACAATTCACAAATGGTGCCGAATATTTCAAAAGGATGTCGATAATAATTTTCAAGGTGAACCAGTATCAAGGGCTGTTCTAATGATGATTTATTCTCCATGGTTAACTTGTTTTTCAAGTTTACCACAGTATCATGGATGTATCATTGAAAGCAAAGGGATAAAGGCAGTTGTTCTTCTTGTGCAACGATGCTTAAGTAATGACATTCATGTAGAAAGGCCTGATGTTGCTTCTCATTTGCATTCAACATTCCATGAAAGGTCTTGTTGCTGGATTGGTAAAGAAGATTGGGAAGGTTCTGATGTTCTTTTATTTTATGGTTTGTGGAGCTTAGCTGAATTTCTTCATCAGTGTGGCCTTTTACAAGATAATCCTCGGCAGTTTACTAGAGAGGTGACCAACATTAAAGCTCAATTAGTTAGCAAACTGAATGAGACCTTTAGTAGCACCTCTTTCAGTCCTGGAGTGAAATGGTATGTTTCTTATATTCTAAGTTATTTTGGATTTTATGGTTTCCCAAATGAATTTGCCAAAAGGATTGGGGAATCTCTTAATAAGGAAGAGTATAAAGATTTGCGACTCATTGTAGCAAATGAGGATTCTGTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTCCATCACTCCTGCCTCCCGAAGTATTATCTAGTAGTAAGAGTTCTAAAGAAGTAACAGATAAGTATGCTGGAGAGACCATGAGAGAAGTTCGTTTATCTTCTCGCGTTGATTATGAAGCATTGTTGTTGTTGTTGGAATATGTATACGTGGGATGCTTACATGCGGGAGAAGAAGCAGTGAAGAAGCTGAAAATTCTTGCTAAGCGTTGCAATCTACAGCCTCTCTTGCGATTGCTTTATAGACAATGTCCAAAGTGGGGCACACTTTTCCCCAGCTTAAATCTTACTTCATCTCTGGATTCAGCTGGAAGTTGTTTTTCGTATGTGCCACATTTGCATGTTCACAAAGTGATATTGCAATCTGGCTGTGATTATTTACGAGGTTTGTTCCGATCAGGAATGCAAGAGAGTCATTCACAAGGTATAAAGGTTCCTATTAGCTGGGAAGCATTGATGAAACTAGTACTGTGGTTATATTCTGATGAGCTGCCAAAACCTCCCTCTGGATGTTTGTGGGATAATATGGATGATGAAGAAAAGCTATTCAATCTGCAACCATATGTGGAGCTTTGTTGGCTTGCTGAGTTCTGGATTTGGGAAAATATTCAGGAAGCCTGCTGGAATGTGATTATGTCTTGTCTTGATTCTTCTAAGCAGTTGTCCATTAAAATAATAAAAATGGCTCATGAGCTCTCTTTGTGGAAGTTGGTTGACATTGCCGCAAATCTCATAGCTCCTTCATATAGGCAATTACTAGATTCTGGTGAACTTGAAGAATTTGATGATGCACTAGTTCACTTAATTTGTTGTGCTTCTATTCGACTTAACCAAGAAGGTGAAAATAGCTTTATGTGA 2658 0.3796 MNAFLDSISGDARAARHSVVKESIADVLRALLWILQCKNGPLLSMASNVALKLVSVLPNPLLQSHLLDLVYCLSSLLSSHQVEVAIPCATALNLVISNLSATSERAVMEALKETDISIRIVGNIKDFAIAAKKIEYFEEMASLLSTILLRWPSSRFPVFNDVEFMNGLANMHTRMDSSIQPVLLKLYTSLALCDSIAKKLIEDGKVFLQMVVQAMGKSNPYDVRIEGFRLAQCLLRSQENCLKVVDLCGEALVDAIVCGMRETGLSSNKNGNNHGSLLMEACRLALITRWAGDHHIIFWKQGIDRVLLNLLFENIQDQSSELILSLEKQISMVKEGLKANYHLGLRSYLWDILGLLTIHCGENFNPYSHGSELHINLLIMCACLTFVDTIHKWCRIFQKDVDNNFQGEPVSRAVLMMIYSPWLTCFSSLPQYHGCIIESKGIKAVVLLVQRCLSNDIHVERPDVASHLHSTFHERSCCWIGKEDWEGSDVLLFYGLWSLAEFLHQCGLLQDNPRQFTREVTNIKAQLVSKLNETFSSTSFSPGVKWYVSYILSYFGFYGFPNEFAKRIGESLNKEEYKDLRLIVANEDSVSVHGVILAVRCPSLLPPEVLSSSKSSKEVTDKYAGETMREVRLSSRVDYEALLLLLEYVYVGCLHAGEEAVKKLKILAKRCNLQPLLRLLYRQCPKWGTLFPSLNLTSSLDSAGSCFSYVPHLHVHKVILQSGCDYLRGLFRSGMQESHSQGIKVPISWEALMKLVLWLYSDELPKPPSGCLWDNMDDEEKLFNLQPYVELCWLAEFWIWENIQEACWNVIMSCLDSSKQLSIKIIKMAHELSLWKLVDIAANLIAPSYRQLLDSGELEEFDDALVHLICCASIRLNQEGENSFM 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi555g00021 885 Gene3D Potassium Channel Kv1.1; Chain A 560 683 IPR011333 -
Sebi555g00021 885 CDD BTB_POZ_ZBTB_KLHL-like 712 769 - -
Sebi555g00021 885 PANTHER OS06G0674800 PROTEIN 423 880 IPR044953 -
Sebi555g00021 885 SMART BTB_4 578 688 IPR000210 GO:0005515
Sebi555g00021 885 SMART BTB_4 702 815 IPR000210 GO:0005515
Sebi555g00021 885 Gene3D Potassium Channel Kv1.1; Chain A 711 855 IPR011333 -
Sebi555g00021 885 ProSiteProfiles BTB domain profile. 713 768 IPR000210 GO:0005515
Sebi555g00021 885 SUPERFAMILY ARM repeat 8 378 IPR016024 -
Sebi555g00021 885 SUPERFAMILY POZ domain 556 679 IPR011333 -
Sebi555g00021 885 SUPERFAMILY POZ domain 713 812 IPR011333 -
Sebi555g00021 885 Pfam BTB/POZ domain 713 776 IPR000210 GO:0005515
Sebi555g00021 885 ProSiteProfiles BTB domain profile. 578 658 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi555g00021 Sebi-Chr555 621542 626061 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Sebi555g00021 BTB 2.1e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi555g00021 - - mtr:25487018 1377.84