Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi554g00041 ATGGATAGCTATAACCAAAAAAGGTTTGATAGGGTAAAGCCATTCATAGGTGTAGTGTTCTTACAATTTGGATATGCTGGCATGGATGTTCTATCCAAGGCTGCAATGAACAAGGGAATGAGCAATTATGTTCTAGTTGTCTATCGCCATGCTGTGGCCTTCATTGTCATGGCTCCTTTTGCATTATTCTTAGAAAAGAAAGTAAGGCCAAAGATGACATTTTCAATCTTCATGAAGATATTGGCTCTCAGTGTGCTAGAGCCAGTTCTTGACCAGAATTTATATTTTTTGGGAATGAAGTACACAACAGCAACTTTTGCAGTTACCATGCTCAATGTCCTTCCTGCCATTACCTTTGTCATGGCTTGCATTCTTAAGCTTGAGAAGATAAAAATAAAAAGTATCCGCAGTCAAGCAAAGGTGGTTGGGACTTTAGCCACTGTTGCAGGAGCCATGGTCATGACATTGATAAAAGGCCCAGTACTTGATCTTTTTGGGACACATAGAAGCAATATCCATAACCAATATAATGGTGGAGCTAATGTTCAACATGCAATAAAAGGATCAGTGATGATCACAATTGGTTGCTTTAGTTGTGCTTGTTTTACAATTCTTCAAGCCATTACCCTTGAAACCTACCCTGCTGAACTCTCTCTTACAGCATGGATATGCCTATTTGGAACAATTGAAGGTGGCATAGTGGCCTTGATTATGGAAAGGGGTAACCCTTCAGTTTGGTCTATAAATTGGGATACAAAACTATTGGCTGCTGTCTATAGTGGCATAATATGCTCAGGAATGGCTTATTACATCCAAGGAGCAGTGATGAAATATAGAGGTCCAGTCTTTGTAACAACCTTCAATCCCTTATGCATGATCATTGTGGCTATCATGGGTTCCTTCTTTTTGGCTGAGCAAACCTACCTTGGAAGGGTGATTGGTGCCATTATCATTATTATAGGGCTATATCTAGTGGTGTGGGGTAAAGGCAAAGATTATGACACACCAAATCCAATTATTAAAGAGCAGATATTGCCAGAAAAGCAACCTACAGAGAGCAACGCCAAAGAGGAGCATTCTAATCACAAGGTCATCGTTATCAATAACTTTGATGCGGGAAACATAACTCAAGATGAACAAGTACGAGGAAACACACAAAATTCAATCTAA 1170 0.3957 MDSYNQKRFDRVKPFIGVVFLQFGYAGMDVLSKAAMNKGMSNYVLVVYRHAVAFIVMAPFALFLEKKVRPKMTFSIFMKILALSVLEPVLDQNLYFLGMKYTTATFAVTMLNVLPAITFVMACILKLEKIKIKSIRSQAKVVGTLATVAGAMVMTLIKGPVLDLFGTHRSNIHNQYNGGANVQHAIKGSVMITIGCFSCACFTILQAITLETYPAELSLTAWICLFGTIEGGIVALIMERGNPSVWSINWDTKLLAAVYSGIICSGMAYYIQGAVMKYRGPVFVTTFNPLCMIIVAIMGSFFLAEQTYLGRVIGAIIIIIGLYLVVWGKGKDYDTPNPIIKEQILPEKQPTESNAKEEHSNHKVIVINNFDAGNITQDEQVRGNTQNSI 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi554g00041 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Sebi554g00041 389 PANTHER WAT1-RELATED PROTEIN 13 333 IPR030184 GO:0016020|GO:0022857
Sebi554g00041 389 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020
Sebi554g00041 389 Pfam EamA-like transporter family 21 154 IPR000620 GO:0016020
Sebi554g00041 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi554g00041 Sebi-Chr554 618793 621032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi554g00041 6 382 Nodulin-like Gene Family AT2G37460 63.325 1.29e-173 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi554g00041 - - gmx:100777050 603.594