Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi554g00028 ATGAGGCGTTGGATCTGCGGTGGCGTGAGGGGTTGGATCGGCGGTTTCAGCGATGTGGAAGAAGCCTCCCCTCCTTCCTTCTCTCTTCACACCCCAAGCACACGGTGGCGAAGCATAAGTGTGAAAACGGCGACAGGGGCTTGGCAGAAAGCATCTCTTCGGTTCAGAGCAAAAGAGGGGAAGGAAGGATGTGCGGTGGTGGCGGCAAGAAACTCCGGGCAAGCTTCATCTCGGCAACGTGTTGTGGTTCCCTCACATTCGCCCTTCATGGCGGTGCCTATGCCCAACGCGCTGCCGTTCCCTCTGGCTGACGAGGTCCCTGCTGATGGAATTCTGATCACGGGTCACTCTCTTGCAATTGATGAATCAAGCATGACGGGGGAGAGCAAAATTGTCCATAAGGATTCTAAAGATCCTTTCCTGATGTCTGGATGTAAAGTTGCAGATGGCAGTGGCACTATGCTGAAAAATGAAAATCATGCAAAGTATGCTTTTAAAAGCCTTGCAAAATGTGCTGCATTGGGGGTGACAAAGGTTGTGGGATATCAGGCAACGGTTAACGGCTCTGGGGTGAGGCAAGATGTGCAGGGAAGTGGACAGGTTAGAATAGATCCTAGAAATATGGAGATTGATCTTGATAGTTTAATGTATGGCAAACTTCCTGAGCTAACTGAGGAAGATTTGAAAAAACAAGAAGGAGATTACATTTATCGTTATCACTATGATGGTGGAGGAGCAACTCAAGTTTGGCTGGGCTCTGGCAGATTTGTGGTGATTGACCTTTCAGTTGGGCCGTGCACTTATGGTAACATTGAAGCTGAAGAGGGAAGTTTGGAGGCTCTAGCTCATCCATTCTTTGATGAGCTGCGAGATCCAAATACCCGGTTGCCAAATGGGCGTTTCCTTCCACCGCTATTTAACTTCAAAGCCAATGAACTTAAGGGAGTATTAACTTGGTGA 960 0.4865 MRRWICGGVRGWIGGFSDVEEASPPSFSLHTPSTRWRSISVKTATGAWQKASLRFRAKEGKEGCAVVAARNSGQASSRQRVVVPSHSPFMAVPMPNALPFPLADEVPADGILITGHSLAIDESSMTGESKIVHKDSKDPFLMSGCKVADGSGTMLKNENHAKYAFKSLAKCAALGVTKVVGYQATVNGSGVRQDVQGSGQVRIDPRNMEIDLDSLMYGKLPELTEEDLKKQEGDYIYRYHYDGGGATQVWLGSGRFVVIDLSVGPCTYGNIEAEEGSLEALAHPFFDELRDPNTRLPNGRFLPPLFNFKANELKGVLTW 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi554g00028 319 Gene3D - 101 170 - -
Sebi554g00028 319 PANTHER TRANSMEMBRANE PROTEIN-RELATED 201 286 - -
Sebi554g00028 319 Pfam E1-E2 ATPase 104 153 - -
Sebi554g00028 319 SUPERFAMILY Calcium ATPase, transduction domain A 103 154 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi554g00028 Sebi-Chr554 435399 440488 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi554g00028 92 155 Primary Pumps ATPases AT3G21180 73.438 8.68e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi554g00028 - - tpra:123920049 151.754