Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi554g00023 ATGGCGCCATTGAACATAACCAATATCAAAACCTCCTCCAATGGAGTTTGGCAAGGTGACAATCCCTTAAACTACGCCTTCCCCACTCCTCATCGTTCAAACCACCTTAGTTCTCGTCGTCAGCCGCGCCCTCGCTTTCCTCTTCAAACCTCTCCGACAACCCAAAGTCATTGCCGAGATCGTCGTATCACGGCTCCAAGTATGGTCGTGTTGGCCGGTACATATGTTTTCACGATATTAAGGGGTCGTTCGGGTGAGGATAATTGGATCTCAATTCCATTCGCCGGAGCGGAAGAAAAAGCATTCACCATAGCCGCCGTCGGGATCTCCGTCCCTTTCATCGGCGGCATCGGCGTGGCGTTCGTCCTCCGCAAGACGATCGAGGGAGCCGATAAAGTCGGTTTCGGTCAATTCATCGTCTTCATGGGAGTGGCACTTTCTATAACCGCATTCCCTGTGCTCGCACGTATCCTAGCAGAACTCAAGCTTCTAACCACACGTGTGGGAGAAACCGCTATGGCTGCTGCCGCATTCAACGACGTCGCTGCATGGATCCTCCTCGCACTCGCCATAGCACTCGCAGGGAACGGAAACGGAGAGAGCAAGAGCCCTCTCGTGTCAATCTGGGTTCTACTCTCCGGTGCAGCTTTCGTGGTCTTCATGATGGTTGTTATTGGACCGTTGATGACAGTGTCGCGAGGAGATGCTCTTGGGAGAATGAGGCCGTTGATGAGTGGGTTGAAAACTGATGTCACTAAAATCCGTGGAGGTAAAGCATGGGGGCTTCTTGCTCTCGTGATATCCACCGCTTGTGCTGGGAAAATTCTAGGGACCTTCATAGTTGCCATCATGTGCAGGATTCCCGCCATGGAATCGCTCACACTTGGCGTCCTCATGAACACCAAAGGTCTCGTCGAGCTCATCGTACTCAACATTGGAAAAGAGAAAAAGGTTTTGAATGATGAAATATTTGCAATCTTGGTACTCATGGCTCTATTCACCACCTTCATCACAACCCCATTAGTGATGGCCATTTATAAACCAGCACGTGGCATCACAGATAAGACTTGTCGCAAATTAGGTGACCTCTCTTCCCACTCTAATAAGAAGGACATGGATGAGCTTCGAGTCCTAGCTTGCATCCACGGTCCAAGTAACATCCCTCCCATCATAAGCCTCATTGAATCAACACGTGGCACCAAAAGTCCCTCATCAAGGTCTTCATCATGCACCTCGTTGAGCTCACTGAACGTTCTTCTTCCATCATCATGGTTCAGCGTGCTCGCAAAAACGGTTTTCCCATTCTTCAACCGTTTCAACCGTGACGAATGGTATAACCGTCTCGCTGGGGCCTTCCAGGCCTACAGTCAATTGGGCCGGGTCTCGGTCCGGTCCACTACCGCTATCTCTTCTCTCTCCACCATGCATGAGGATATTTGCCACGTGGCGGAGGAAAAGCGCGTGACTATGATCCTATTGCCCTTCCACAAACAATGGAGGATGGAAGTTGATAATGACGACAATGAGGCCCATGTCCATGAGGTGTTGGAGAATGCGGGCCATGAATGGAGAGGGGTGAACCAAAGGGTGCTTAAGAATGCGCCTTGCTCTGTGGCTGTGCTTGTGGACCGAGGACATGGCATTGGGTCTAAGACTCCAGGCCCAAATACGACCGAGGCCCAGAGAATATGTATTGTGTTCTTTGGTGGGCCTGATGATCGAGAGGCTCTTGAGTTGGGGAAGAAAATGGCTGAACACCCGACAGTTGAAGTGACGGTTGTAAGGTTCGTTGAGAAAGATGGGTTGAATAGTGATAACGAGTTGGATGAGAAGGCAATGGCAGAGTTTAGAAGCAAGTGGGAGGGGACGGTGAAGTATATGAGAAGGTTCCCATCGAATATGGTGGCAGAACTAGCAGAGAGGGAAGCAGAGCATGCTGAGTTAGGACCTATAGGGGACATTTTAGCATCATCTACCGGACAAAAGAAGATAGTGTCATCGGTTTTGGTTATTCAACAACATGATGTGGCGTTGATGGAGGAGGCTCCTATGTGTAAGGTGCATGATGAGAATATAGTTCAGAATTTGTCCTTCAGGGGGGAGATTTCTGTAGCCAATGACAATGCAGTGTAA 2133 0.4984 MAPLNITNIKTSSNGVWQGDNPLNYAFPTPHRSNHLSSRRQPRPRFPLQTSPTTQSHCRDRRITAPSMVVLAGTYVFTILRGRSGEDNWISIPFAGAEEKAFTIAAVGISVPFIGGIGVAFVLRKTIEGADKVGFGQFIVFMGVALSITAFPVLARILAELKLLTTRVGETAMAAAAFNDVAAWILLALAIALAGNGNGESKSPLVSIWVLLSGAAFVVFMMVVIGPLMTVSRGDALGRMRPLMSGLKTDVTKIRGGKAWGLLALVISTACAGKILGTFIVAIMCRIPAMESLTLGVLMNTKGLVELIVLNIGKEKKVLNDEIFAILVLMALFTTFITTPLVMAIYKPARGITDKTCRKLGDLSSHSNKKDMDELRVLACIHGPSNIPPIISLIESTRGTKSPSSRSSSCTSLSSLNVLLPSSWFSVLAKTVFPFFNRFNRDEWYNRLAGAFQAYSQLGRVSVRSTTAISSLSTMHEDICHVAEEKRVTMILLPFHKQWRMEVDNDDNEAHVHEVLENAGHEWRGVNQRVLKNAPCSVAVLVDRGHGIGSKTPGPNTTEAQRICIVFFGGPDDREALELGKKMAEHPTVEVTVVRFVEKDGLNSDNELDEKAMAEFRSKWEGTVKYMRRFPSNMVAELAEREAEHAELGPIGDILASSTGQKKIVSSVLVIQQHDVALMEEAPMCKVHDENIVQNLSFRGEISVANDNAV 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi554g00023 710 MobiDBLite consensus disorder prediction 28 59 - -
Sebi554g00023 710 Pfam Sodium/hydrogen exchanger family 99 229 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Sebi554g00023 710 Pfam Sodium/hydrogen exchanger family 244 341 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Sebi554g00023 710 Gene3D - 94 241 IPR038770 -
Sebi554g00023 710 Gene3D - 243 351 IPR038770 -
Sebi554g00023 710 Gene3D - 456 669 - -
Sebi554g00023 710 MobiDBLite consensus disorder prediction 43 59 - -
Sebi554g00023 710 PANTHER CATION/H + ANTIPORTER 244 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi554g00023 Sebi-Chr554 384053 389062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi554g00023 99 704 Antiporter Super Family AT3G53720 47.012 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi554g00023 K26731 - qsa:O6P43_010405 702.59