Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi554g00009 ATGAAGGACAACATGAAAGTCATGGAAGCTTGTAAGCTAACAGCACTTGTTGTTGATGATGACACAATGGTCCGAATGGTTCATGGAAAGATGTTGAACAGTGTTGGAGTGAAAATTCAAGTCGTGGAAAATGGCAAAGAAGCCATTGACATTCACCATTCTGGACAAAGTTTTGACTTGATTCTCATGGATATGGACATGCCTATTATGAATGGCATTGAGGCAACAAAGGAACTTCGGTCTATGGGAATTCATAGTATGATTGCTGGTGTATCAGCAAACTGTGTGGAAGCACATAAACGAGCATTTATGGAAGCAGGATTGGATGACCACTTGGAGAAGCCTTTGACCATTGCTAAGCTTACATCCATCATTCACAAGATCAAGGACGGAGCTGAGATTTTTTCATTAGAAGATCATAATAAGATATTATAA 435 0.3931 MKDNMKVMEACKLTALVVDDDTMVRMVHGKMLNSVGVKIQVVENGKEAIDIHHSGQSFDLILMDMDMPIMNGIEATKELRSMGIHSMIAGVSANCVEAHKRAFMEAGLDDHLEKPLTIAKLTSIIHKIKDGAEIFSLEDHNKIL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi554g00009 144 SUPERFAMILY CheY-like 13 130 IPR011006 -
Sebi554g00009 144 Gene3D - 2 135 - -
Sebi554g00009 144 Pfam Response regulator receiver domain 16 125 IPR001789 GO:0000160
Sebi554g00009 144 ProSiteProfiles Response regulatory domain profile. 14 129 IPR001789 GO:0000160
Sebi554g00009 144 SMART REC_2 13 125 IPR001789 GO:0000160
Sebi554g00009 144 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 132 - -
Sebi554g00009 144 CDD REC_hyHK_CKI1_RcsC-like 16 125 - -
Sebi554g00009 144 ProSiteProfiles Intein N-terminal splicing motif profile. 95 144 IPR006141 GO:0016539
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi554g00009 Sebi-Chr554 187809 188642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi554g00009 13 131 Response Regulator Gene Family AT3G04280 44.628 1.19e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi554g00009 Response_reg 6.5e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi554g00009 - - gmx:100819813 155.221