Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi553g00039 ATGACGCAATTCACACCACCACTACCTCCTTTGCACCAAATCACACCTTCTTCCATGAACAAAAATAATCAAATTCCTAGAACTAGGCCATGGCCTACAGGCTTCCCCACATCTAAGGCCCTCAGTAGCTTTGGAGATGCAAACTGCATGGAACAGTTACTTGTTCACTGTGCCAACGCCATAGAAACCAACGATGTAACTCTCGCCCAACAGATCCTTTGGGTCCTTAACAACCTAGCACTCCCAGACGGTGACTCCAACCAACGCCTAGCCTACAGTTTCCTTAGAGCTCTAACCGCTCGAGCAGCCAAGACTGGCAGTTGCAAGATGCTGTTAGAACAAGTTGTTGCAAACACCCCTAACAACCTCACTATGGACACTCACAAATTCTCAATCCTTGAGCTAGCTAATTTCGTTGACTTAACCCCTTGGCACCGTTTCGGCTTCACAGCTGCTAATGCTGCTATTCTAGAAGCTACTGAAGGATTCTCTGTCATCCACATCGTGGACTTAAGCTCGACACATTGCATGCAGATTCCTACACTGATAGACACTATTGCTAACCGTCATGACGTGGCTCCTCTGATCAAACTAACAGTAATAGCTGATGTTGCTATGAGAGAAATTCCACCTATGCTTGATCTTTCCTACGATGAACTCGGTGCTAAATTAGTCAATTTCGCAAGGTCAAGAAACGTGATCATGGAATTTAGAGTGGTTTCTTCAAGTTACACAGATGGTTTCGCTGCTTTGCTTGAAGATTTAAGAGTGCAACGCTTGGTTCACATTGCAGAAGCTGCTACTGCTGAAGCTTTGATTATAAACTGTCACATGATGCTTCATTATATACCTGATGAAACCCTATCTGCAATTCCTGGCACAGACTTAGCCTCTTATGTTTATGATTCTTCTTCTTGCACTGCTTCTGTTACTCCTATCATGTCGCTGAGATCATTGTTCCTTAAAGCCCTGCGGGGTTTAGATCCAACGGCTGTGCTTTTGGTAGATGAGGATGCAGATTTAACATCGAATAACTTGGTTTCGAGACTAAAGTCTGCGTTTAATTATCTATGGATACCTTATGACACTGTGGACACGTTCCTTCCGAGAGGGAGTAAACAAAGGCAGTGGTATGAAGCAGACATTTGCTGGAAGATTGAGAATGTGATAGCACATGAAGGGATTCATAGAGTTGAACGGCTTGAGGCTAAGAGCATGTGGGAGCAACGAATGAGAAGTGCAAACTTCCAAGGGATAGCTTTCAGTGAGGACTCTGTTGGGGAGGTGAAGGCCATGCTGGATGAACATGCTGCTGGATGGGGATTAAAGAAGGATGATGAACATATTGTGCTCACATGGAAAGGCCACAATGTAGTCTTTGCCTCTGCTTGGTTGCCTGCTTGA 1404 0.4473 MTQFTPPLPPLHQITPSSMNKNNQIPRTRPWPTGFPTSKALSSFGDANCMEQLLVHCANAIETNDVTLAQQILWVLNNLALPDGDSNQRLAYSFLRALTARAAKTGSCKMLLEQVVANTPNNLTMDTHKFSILELANFVDLTPWHRFGFTAANAAILEATEGFSVIHIVDLSSTHCMQIPTLIDTIANRHDVAPLIKLTVIADVAMREIPPMLDLSYDELGAKLVNFARSRNVIMEFRVVSSSYTDGFAALLEDLRVQRLVHIAEAATAEALIINCHMMLHYIPDETLSAIPGTDLASYVYDSSSCTASVTPIMSLRSLFLKALRGLDPTAVLLVDEDADLTSNNLVSRLKSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGIHRVERLEAKSMWEQRMRSANFQGIAFSEDSVGEVKAMLDEHAAGWGLKKDDEHIVLTWKGHNVVFASAWLPA 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi553g00039 467 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 49 454 IPR005202 -
Sebi553g00039 467 MobiDBLite consensus disorder prediction 14 33 - -
Sebi553g00039 467 ProSiteProfiles GRAS family profile. 41 465 IPR005202 -
Sebi553g00039 467 MobiDBLite consensus disorder prediction 1 33 - -
Sebi553g00039 467 Pfam GRAS domain family 50 464 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi553g00039 Sebi-Chr553 653345 654748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi553g00039 32 466 GRAS Transcription Factor Family AT3G49950 56.264 1.35e-171 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi553g00039 GRAS 5.6e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi553g00039 - - gmx:100814364 728.013