Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi553g00029 ATGGGTGAAAATGTTGAATCAATCATTCCGTCACATGAACATGAAGATCATGATTCGAATGAGAACCTTAGTGATGATGAAGATATAGATGTGTTTAAGATTGATGATGAAATTGATTTCAAGAGAATCGAGTTTGTTAGCTTATCTGAATCTGACTTGAAGTTGTATCATTTTAGTAGTCGTAAGATGGCGTTTGAATTCTACAATGCTTATGCAGAAAAGAGGGGATTTGCAGGTAGAAAGTGGAACACAGTTAAAAACATACAAGGTGTTGTTAGTCAACAGACATTTGTTTGTTACAAGCAAGGTTATAGGTTGGATAAGCATTTGAAGAGGACTGACCGCAAGAAGGAACCTAGAGCAATGACGAGGTTTGGTTGTGATGCCTTCTTTCGGGTGTGGCTCTTAACAGACACTGGTCGGTGGCATGTTAAAGCTCTTTCTAATGATCACAGTCATGAGATGTTAGCACCACAATTTGTTGGAATGTTTCCTGCACATAGGAAGATGGATGAATGTGAGCTTATGCAGATGAATACAATGAGAGATGCTGGAATTGGTGTGACACAAATTTATGGATTAGTTGTAAATCAGTCAGGGGGTTATGAGAGAAAACTCCAATCTCGTGATTCCAACATGTTTTGGAGGCATACTGTGGATGCAGAAGCATTTGATGCTACCTATCGACGTAATAAGTACATGTGCCCTCTGGTTGTGTTTGCTGGAGTTAATCATCATAACCAAACAATTGTGTTTGGTAGTGGTTTAATTGCAAACGAAACTGAAGAGACGAATGCCACTAGCAACATTAGCAACCCACGGTTCACCTCAAAATTTAGATGGTGTATGCTTGGTGATTATGATGTAGCGAGGTTTCGTTCCAAATGGGATGAATTAGTGAGTGAGTTTGATTTGCATGGTAATCAATGGGTAAGAGATTTGTATGAAAAGAGAAAAATGTGGGCAACGACACACATTAGAGGTAACTTCTTTGCTGGTTTTCGGACAACATCACGGTGTGAGGGGATGCACTCTCAAGTTGGGAGGTATGTTCACTATCGCAATAATCTGACTGAGTTTCTGAAGCATTTCTCTCGATACCTGGCTTATATAAGGCAGCGAGATGTGGAGGCCGATTTTGAATCAATAATTGGTGATCCTGTTTTGCAAACAACCTTTGAGGCTATTGAGAGGGATGCTGCTAAGTTTTATACAGGAAAGGTGTTTTTGTTATTCCGGCCAGTGTTGGAAAGGGCTTCTGGTGTAAAGGTTGTTTCTTGTGAGCAAACACCAAATTGCTTGAGATATGTAGTGACTTCTAAGAGATCTAGGCAGGCCCGTCAATGGTTTGTTTCAGTTGAACCATCAGCGTTAGAATTCAAGTGTTCATGTCTTCAGATGGAGTCAATGGGAATTCCTTGTGAACATATAGTTGTCTTGTTGCATTATTTGGAGATTAATGAATTGCCTGCGGGTAGAAGTGATCCTAACCTTGATCTATCAAAAGAAGTTGTGAGGGAGCTATTAAGTAAGTTAAGATATTCCTGTATACCATCCGTAGGGGAAACATTAAATGAAAATGATGGTGCCGATGAAGATGGTGGGGTGAGGGACCCAGCCCGTGTTAGGACCAAAGGTTGTGGATCACGACATACAAATGGGAGTGTTAAGGTCACTAGAAGAACAACATGTTGTAGTATCTGTCAGAGACCTGGCCATAACAAAAAGACATGTCCTCGCCGAGGAGCTGAAGGTAATGGTGGAACCTCCACCATTATGGAAGAAGGTTAG 1791 0.4076 MGENVESIIPSHEHEDHDSNENLSDDEDIDVFKIDDEIDFKRIEFVSLSESDLKLYHFSSRKMAFEFYNAYAEKRGFAGRKWNTVKNIQGVVSQQTFVCYKQGYRLDKHLKRTDRKKEPRAMTRFGCDAFFRVWLLTDTGRWHVKALSNDHSHEMLAPQFVGMFPAHRKMDECELMQMNTMRDAGIGVTQIYGLVVNQSGGYERKLQSRDSNMFWRHTVDAEAFDATYRRNKYMCPLVVFAGVNHHNQTIVFGSGLIANETEETNATSNISNPRFTSKFRWCMLGDYDVARFRSKWDELVSEFDLHGNQWVRDLYEKRKMWATTHIRGNFFAGFRTTSRCEGMHSQVGRYVHYRNNLTEFLKHFSRYLAYIRQRDVEADFESIIGDPVLQTTFEAIERDAAKFYTGKVFLLFRPVLERASGVKVVSCEQTPNCLRYVVTSKRSRQARQWFVSVEPSALEFKCSCLQMESMGIPCEHIVVLLHYLEINELPAGRSDPNLDLSKEVVRELLSKLRYSCIPSVGETLNENDGADEDGGVRDPARVRTKGCGSRHTNGSVKVTRRTTCCSICQRPGHNKKTCPRRGAEGNGGTSTIMEEG 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi553g00029 596 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 57 486 IPR031052 GO:0006355
Sebi553g00029 596 MobiDBLite consensus disorder prediction 573 596 - -
Sebi553g00029 596 ProSiteProfiles Zinc finger SWIM-type profile. 449 485 IPR007527 GO:0008270
Sebi553g00029 596 MobiDBLite consensus disorder prediction 530 545 - -
Sebi553g00029 596 MobiDBLite consensus disorder prediction 525 554 - -
Sebi553g00029 596 Pfam FAR1 DNA-binding domain 66 156 IPR004330 -
Sebi553g00029 596 Pfam MULE transposase domain 224 264 IPR018289 -
Sebi553g00029 596 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi553g00029 Sebi-Chr553 439127 441375 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi553g00029 FAR1 1.7e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi553g00029 - - tpra:123913749 458.759