Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi553g00007 ATGGAATCCCAATTAGATGATGGAAATGGCGGGATGGAAGTTTCCGGGGATGTTGGTTTGGGTACATATGAAGTTCAGATACATCAAGAAACATATGAAGTGGATCCAAATGAGGGGTGTAGAGTGCTAGAGAGCTCTTCCGGGGGAGAATTGGGTACTTCTGATGACCATGCTATTCAGGAACCATTTGAAGGCATGGAATTTGAATCTGAAGATGCCGCTAAGATATTCTATGATGAATATGCCCGACATGTAGGATTTGTCATGCGTGTGATGTCTTGTCGACGCTCAGAAAGAGATGGTAGGATTCTTGCCCGTAGGCTGGGATGTAATAAGGAGGGTTATTGTGTCAGCATCCGGGGGAAATTTGGGTCAATTCGTAAACCAAGGGCCAGCACAAGGGAAGGTTGTAAGGCAATGATTCATATCAAATGTGATAAGTCTGGAAAATGGGTGATAACAAAGTTTGTGAAGGATCATAATCATCCACTAGTAGTCTCTCCACGTGAAGCACGTCAAACAATGGATGAGAAGGATAAGAAAATTCAGGAATTAACATCAGAGCTTCGGAATAAAAAACGGTTGTGTGCAACATATCAAGAACAGTTGACTTCTTTTATTAAAATTGTTGAAGAGCACCGGGACAAGCTGTCTGTGAAAATTCATAACATAGTTAATAATCTTAAAGAATTTGAATCCATAGAAGAGCTTTTGCACCAGACATAG 726 0.4105 MESQLDDGNGGMEVSGDVGLGTYEVQIHQETYEVDPNEGCRVLESSSGGELGTSDDHAIQEPFEGMEFESEDAAKIFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGSIRKPRASTREGCKAMIHIKCDKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTSELRNKKRLCATYQEQLTSFIKIVEEHRDKLSVKIHNIVNNLKEFESIEELLHQT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi553g00007 241 Pfam FAR1 DNA-binding domain 77 165 IPR004330 -
Sebi553g00007 241 Coils Coil 175 202 - -
Sebi553g00007 241 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 23 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi553g00007 Sebi-Chr553 79505 83874 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi553g00007 FAR1 3.7e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi553g00007 - - gmx:100793266 432.18