Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi552g00006 ATGGCTTCAAGAGTAGAGACCGATGAAGAGGGTGATAACAAAGGTAGTATGTGGGATTTGGATCAGAAACTTGACCAGCCTATGGATGAAGAGGCAGGAAGGCTCAAAAATATGTACAGAGAAAAAAAATTTTCTGCACTGTTGCTTCTGCGGCTTGCATATCAGAGTCTTGGTGTAGTTTATGGAGATTTGGGCACTTCACCCTTGTACGTATTCTACAATACGTTTCCTAATGGTGTAGAAGATCAGGAGGATGTAATTGGAGCTCTTTCTTTGATTATCTATTCTCTTACTTTGGTGCCGCTCCTCAAATATGTTTTTATTGTGTTGAGAGCAAATGATAACGGCCAAGGTGGAACATTTGCGCTTTATTCCTTGCTCTGCCGACATGCAAAGATAAAAACCATTCCCAACCAGCATCGCACTGATGAAGAGCTAACAACATATAGTCGGTCTACCTTCGATGAAAGGTCATTTGCTGCAAAAACCAAAAGATGGTTAGAGAATCGTGAATCTAGGAAGAGTGCCATTCTTATTCTTGTCCTTGTTGGCACCTGCATGGTGATTGGAGATGGGATTCTTACCCCAGCTATATCTGCTGTTGGTGGCATCAAGGTTAATCAACCCAGCATGAGTAGTGGTGTAGTAGTGCTGGTTGCTGTTGTAATATTAGTTGGGCTTTTCAGCATGCAACATTATGGCACAGATAAAGTTAGTTGGCTCTTTGCTCCAATTGTCCTTCTTTGGTTTCTCCTAATTGGAGGCATTGGTGTATATAACATCTGGAAGTATGGAAGCAGTGTTCTAAGGGCTTTTTCTCCTGTGTATATTTATCGCTATTTCAAAAGAGGAGGAAAAGATGGATGGACTTCCCTTGGTGGTATCATGCTCAGCATAACAGGGACAGAGGCTCTTTTCGCTGACCTAGCTCATTTTCCAGTCTCATCGGTACAGCTTGCATTTACTGTAGTTGTGTTTCCTTGCCTTCTTTTAGCCTATTCTGGACAAGCTGCTTACCTTATGAATAACTTGAGTCATTCACAAGATGCTTTTTATCGTTCTATTCCAGATAGAATATACTGGCCAGTATTTGTTGTTGCAACAGCAGCAGCCATAGTTGCAAGCCAGGCCACAATAACTGCAACTTTTTCGATTATTAAGCAAGCCCTTGCTCATGGATGTTTCCCTAGAGTTAAAGTTGTATATACATCAAAGAATTTCCTTGGCCAGATATATATTCCAGATATCAATTGGGTCCTTATGATTCTTTGCATTGCCGTTACTGCTGGATTCGAAAATCAAAACCAGATTGGAAATGCATATGGTACTGCAGTTGTGATAGTCATGCTGGTTACAACATTCCTTATGATTTTAATCATGATATTAGTGTGGCGCTGCCATTGGATTCTTGTCTTTATCTTCACTTGCTTATCATTGATTGTGGAATGCACATACTTCTTCTCAGTACTCTTCAAAGTTGATCAAGGTGGGTGGGTTCCCCTTGCAATAGCTGGAGCATTTCTTGTTATCATGTTTGTCTGGCATTACGGTACACTGAAACGCTACGAGTTTGAAATGCATAGTAAGGTCTCAATGGCATGGATTCTTGGACTTGGCCCGAGTTTAGGACTTGTTCGTGTCCCTGGAATTGGACTAGTCTACACAGAACTTGCAAGTGGAGTACCCCACATCTTTTCTCATTTCATCACCAACCTACCAGCCATTCATTCTGTTGTGGTTTTTGTATGTGTCAAATACCTTCCTGTCTACACAGTCCCAGAAGATGAGAGATTCCTTGTCAAGAGGATTGGACCTAAGAATTTTCACATCTTTCGATGTGTGGCGCGATATGGCTATAAAGACCTGCATAAGAAAGATGATGAGTTTGAGAAGAAACTCTTTGATAATCTTTTCATGTTTGTTCGGCTCGAGTCTATGATGGAAGGATTTTCAGATTCAGATGAATACAGTTTATATGGACAGCAAACACATCAATCAAGAGATGGCCTATTGAATAACAATGGAAATACAACTTCTTCCAATATGGATTTAACAATTTCCTCAGTAGATTCAATAGAACCAGTTAGATCACCAGCACATGTGAATATTACTACTGTCAGGTCCTGTGGTCAAGTAAGCAGCCACACAGAGGTTGATGAACTTGAATTTTTGAATAATTGCAGGGATGCTGGGGTTGTTCACATACTAGGAAACACAATTGTGAGGGCAAGGAGGGATTCAAGGTTCTATAAGAAAATAGCTGTTGATTATATATATGCATTTCTTAGGAAGATATGCAGGGAAAATAGTGTGATCTTCAATGTTCCTCATGAGAGTCTCTTAAACGTTGGTCAGATTTTCTCTGTATAG 2370 0.4038 MASRVETDEEGDNKGSMWDLDQKLDQPMDEEAGRLKNMYREKKFSALLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPNGVEDQEDVIGALSLIIYSLTLVPLLKYVFIVLRANDNGQGGTFALYSLLCRHAKIKTIPNQHRTDEELTTYSRSTFDERSFAAKTKRWLENRESRKSAILILVLVGTCMVIGDGILTPAISAVGGIKVNQPSMSSGVVVLVAVVILVGLFSMQHYGTDKVSWLFAPIVLLWFLLIGGIGVYNIWKYGSSVLRAFSPVYIYRYFKRGGKDGWTSLGGIMLSITGTEALFADLAHFPVSSVQLAFTVVVFPCLLLAYSGQAAYLMNNLSHSQDAFYRSIPDRIYWPVFVVATAAAIVASQATITATFSIIKQALAHGCFPRVKVVYTSKNFLGQIYIPDINWVLMILCIAVTAGFENQNQIGNAYGTAVVIVMLVTTFLMILIMILVWRCHWILVFIFTCLSLIVECTYFFSVLFKVDQGGWVPLAIAGAFLVIMFVWHYGTLKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEDERFLVKRIGPKNFHIFRCVARYGYKDLHKKDDEFEKKLFDNLFMFVRLESMMEGFSDSDEYSLYGQQTHQSRDGLLNNNGNTTSSNMDLTISSVDSIEPVRSPAHVNITTVRSCGQVSSHTEVDELEFLNNCRDAGVVHILGNTIVRARRDSRFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFSV 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi552g00006 789 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 41 786 IPR003855 GO:0015079|GO:0016020|GO:0071805
Sebi552g00006 789 Pfam K+ potassium transporter 54 621 IPR003855 GO:0015079|GO:0016020|GO:0071805
Sebi552g00006 789 MobiDBLite consensus disorder prediction 1 20 - -
Sebi552g00006 789 NCBIfam potassium uptake protein 52 787 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi552g00006 Sebi-Chr552 115745 121212 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi552g00006 1 789 Inorganic Solute Cotransporters AT1G31120 78.348 0.0 1239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi552g00006 K03549 - gmx:100794454 1386.32