Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi552g00003 ATGAAGAATAAGATGGTGAAGGGACGCCAAGGAGAGCGCGTCAGATCCAAATCAAACCAATACCCAAACACATCTCTGGTCCAAATTGAGGGAGTGAACACTACAGAAGAGGTGTCATGGTACGCTGGCAAGCGGATGACATATATCTACAAGGCCAAGGTGAAGAAGAATGGAACCCATTACCGCTGCATATGGGGTAAGGTTACAAGGCCTCACGGAAACAGTGGTGTTGTTCGTGCAAAATTCAAGTCAAATCTTCCTCCCAAATCAATGGGAGCACGGGTAAGGGTGTTTATGTATCCAAGTAACATATGA 315 0.4571 MKNKMVKGRQGERVRSKSNQYPNTSLVQIEGVNTTEEVSWYAGKRMTYIYKAKVKKNGTHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi552g00003 104 MobiDBLite consensus disorder prediction 1 20 - -
Sebi552g00003 104 ProSitePatterns Ribosomal protein L35Ae signature. 66 87 IPR018266 GO:0003735|GO:0005840|GO:0006412
Sebi552g00003 104 Gene3D translation elongation factor selb, chain A, domain 4 2 104 IPR038661 -
Sebi552g00003 104 PANTHER 60S RIBOSOMAL PROTEIN L35A 11 104 IPR001780 GO:0003735|GO:0005840|GO:0006412
Sebi552g00003 104 Pfam Ribosomal protein L35Ae 14 98 IPR001780 GO:0003735|GO:0005840|GO:0006412
Sebi552g00003 104 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 6 98 IPR001780 GO:0003735|GO:0005840|GO:0006412
Sebi552g00003 104 FunFam 60S ribosomal protein L35a 2 104 - -
Sebi552g00003 104 SUPERFAMILY Translation proteins 12 98 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi552g00003 Sebi-Chr552 33392 35141 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi552g00003 5 104 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 83.036 7.86e-64 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi552g00003 K02917 - jre:108991888 194.512