Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi551g00015 ATGGGCTCGTGTGGGGAATCTGCTATCGATGACGATTCCTTAGGAGGGTCTGTTGTTGAGAAACACATGTGTTCAGAGATTCCGGTACAGTTAGTTTCTGTGCAGAAGTCATGTTCAGAAGAAGCTCGCAATGTGTTGGACTCTAATGTTGACCTCTCCGATATGGCCGATGGTTGTATAGGAGAGGGCTATGAGGGTTCTGCAAGCTTTGTTGATGTTACTGAGGGGTCTAGAGATGTTTTGGCAAATGAATGTGAAAATGCTGATGTGTCGCGATTGGAGAAAACTGCTGAAGATGATTGTCAGAATTGTTTGGGGATTTGTTGTGAGGACAGTGAAGTTTCCTGTCTAAAAGGTGGTGGGTTCAGCTCAGAAGGAAATTTTCAAGATGAAGGCACCACAGCCACAAATAGTTTGCAGAAGCATTGTGCTCAACAGGGTGAGCAGAAGGATGATAGGAGCAACATTTTATTATCTGCAGGAGATGGTTCAGGAGTCATGGAAGGAAAAAATGATGACACTGGTTTACTCGCTGATGCTTTCAATTGTGCGCTTGATTCCAGGCATTCTGAAATGTCTTCGGAACCAGAATACATGGCTGACTTGCTAGTTGATTGCAACCCTCAAAATGAACCAGAGGAGATTATGAGAAATGCAGATACCTTGTCGAAGGTTGAGGAAAAATGTAATGCTTTAGATGGGATGGAAGCCGATGCTTGCAGGAAGATGTCTCCTTCACAGGGTATGGAAGTGCTGTCAGGTGCATTATGTACAGATACAGAAGTGAAGAGCACAAGTGATGAGCTATGTGATCAGAAAGAGGGTGAGGATTGGAATAGTACCTGTGAAGAAAAGGCTAAAGCTGTTATTGATAAAGAAATCACTATTGATTCAGATGTACAAGTATCATTCTCACAAGGTTGCCATAGGACCTTGGGGAGTTTACCTGTAGTTGATTCAGTTTGTGAGCCTACCTTGCTGGATCCGGGGAATGAAATGAAAAATGGTATACTGCAAATAGAAGATAACTTCTGTAAATTGAAGGACTGTTCCGCAGAGGGACCTGCCAACTCTACCTTTAATAAACCATTTTATCCAGAATCAGGTCATCCCTCAGTTGTTTTAATCACCAATAGCTCTTCAAAAGATGTACCTGATCTCCTTTCTAACGGTGATGATGTTTCCATCAATAATAATAGTGCTGTGGACAATTCTGGACAGACAAATAATGATGGAAAAGAAGCTGTTGAAGTTGATTGTATCACTGAAAGCATACAGTTACCTTCTCAAAGGAATAGTCGAAGAACCAAATTTGGTTGCAAGACACAAACCAAAAAGGCTTCAAGAAAATGCAAGAACAAAGCCGGTGTGACACATCCAGGTGGGGGTATGAAGATAAACTTAGAGGCTTCTAGAAAGAAAAGAAGTTGTTTATCCAAACCAGCTCGTTCTTCTATCTGGGGATTGCTTGGAAACATTAAACAGTTTTTTCCGCAAGATAATAAGATAGAAGTCAGTGAAGCCATGTGCCGGGAATTGGGGAAGGCTAGAAGCAAGCGTCAAGGTGGGAAAGCGATTAAGAACAGTGCAAATTCTAGCTCATTGAATTCAGTGCAGAAGTACTCTGTTTCAACTTCAACTACTCGTGTTCGTCTAAAGATCAAGTTTGGAAAAGAAATTGATTTAAGTAGCTCAAATGTCTTGATTCCAGAGGCTGTTGGTGGCTTGGCATCTGCTTCCTACTTGGGGTCTGATTTAGGTTCTCAGAAAGTAGCTAGCAATGCTGAAGATAGAATTTCTGAAGTGGTGGCTTTGGGCAATTTAGAATCTTTCAAAACTGACCTGGATAAGGATGGTCTTGTTCTGAATGGGCAAATTGCAAATTGCCACTTACAAAATACTGAAATAACGGAGAAGTCAGATGGGGATACTGAGGAACCATGTCTTGAAGTTCCTCCACAGAAGGAGGTTGAAGCATTACATAAGCCAATGAATGATAAGGCTATGGATCCTGGAACTTCACCTGATTCAGAAGTTATCAATTCAGTTCCAGAAGTCCAGGTTGGAGAAAGACATGAAGAAGATGTACATCATGCTGTTTTAGGTTCTTCTAAGGAGTTCAATTCTAATTTGGATGTTATCATCAGTGAGAGAGGGAAGAAGAAAGACAAGCTTATTTGTTCAGGTAATTATATCACTGAAGACGGATCCCAAGGTCCAACAGGGAAAAATAGAGCTAAGCAGTCAAAGAATCGCAGACGTAAAAAGAATTGCAGTGACGCTGTTAGCTCTATGGAATTGCCTACTTCCACTGAGATAAGCAAATCGGTAAACAGTAAAGAATTGTCTACAGAATCATTGCCTCTTTCTGGAGTGATTGAATTTGGAGGCTCCACTGAGGCTTTGAAAGATAAAAGTCACATGGAAGTTGAGACAACTTGCAAACCATCTGTTGACCATGGATTTTCAGAATACCAGGGTTCTGAGAATTTGCTCTGTTCTGCAAGATCTTTGGGGCGTAAACTACCGAAAAGTCTTCAACCTAGTAAAGTTAGCAAGGCCAAACCTAAAGCTTCTGACTCAATGAGCAGGAAAAAGACAAGTTCCAGACGCAAGGAGAAACAGAAGAAGCCAATCAGTAAAAGTGAAGTCAAGGGAAAAGGTGTCTCTCTTAAAGTTAAATGTGAAGTGGAAGACCACCCACATCCAGCAGGTGTAGTTGGAAATCATAAGGTGGACGCTGTTGGAAAAAATAATGCCAGTGACAACAGAGTATCAGTCAATGTATCTAATTTGGACATGTTGCCTGGTGTTGGTTTGGGAGAGCAACATCTATCACCACGTAACGCATGGGTGCGTTGTGATGATTGTCACAAGTGGCGGCGTATTCAAGCTGTGCTTGCAGACCGGATTGATGAAACTAACTGCAACTGGACATGTAAGGACAGCAGTGATAAAGAGTTTGCTGATTGTAGTATCCCTCAAGAAAAGTCAAATGCAGAGATTAATGCAGAATTGGGATTATCAGATGCCTCTGGTGAAGAAGATGTGTATGAAGACTCGAAAAATTACAAGGAATTGGGATATCGACGACCATTTGTTTCTCAGGAGTCAACTTTTACCCGTATTTTCACCAATGAGTTTCTGCATCGTAGTCGTAAAACTCAGACTATTGATGAGATAATGGTCTGCCATTGCAAGCCCCCTCAAGAAGGCAGGTTGGGCTGTGGGGATGAATGTCTAAACCGGATGCTTAACATTGAATGTGTGCAAGGAACCTGCCCATGTGGGGACTGTTGTTCCAATCAGCAGTTCCAAAAACGCAAGTATGCCAGCCTGAAGTGGTTTAAATGTGGGAAAAAAGGTTATGGACTAAAGGCAGTTGAGGATGTAGCTAAAGGACAGTTTCTTATTGAATACGTTGGAGAGGTGCTTGATATGCAAGCTTATGAGGCACGGCAGAGAGAGTATGCTTTGAAGGGTCATAGACATTTCTATTTTATGACCTTGAATGGGAGTGAGGTGATAGATGCGAGTGCAAAAGGAAACTTGGGGCGTTTCATTAATCATAGCTGTGATCCTAATTGTCGGACAGAAAAGTGGATGGTGAATGGGGAAATCTGTATTGGACTGTTTGCATTGAGGGATATTAAGAAGGGTGAAGAATTGACATTTGATTACAACTATGTAAGGGTTTTTGGTGCTGCTGCCAAAAAATGTTATTGTGGTTCACCTCATTGTCGAGGTTATATAGGTGGTGGTGATCCACTCAATGCTGAACTGATAGTTCAAGGTGATTCAGATGAAGAATTTCCAGAACCTGTGATGCTTAATAGAGATGGTGACATTGAGGACAGTGTGCCTATACCCGAATACTTTGATAATGTTGATACACTGTCTTCTAAGTATTTGTTAAAAGACAGGGATGTACTGGACAAGTCTACAACTGCTACAGATGCAAATGGTTCTCCAGAGAAAGAGAGCTCTATGAACCCTGCCTCTGCTGTTTCCCTGTTGCACAGCTCAGTTGAAGTGAATGACTCAAAGGGCAAGTTACCATCTTCTATTCGAACAGAAGAAATTTCTCTCCAAATGGAGGATATAACAAGCAAACGCATGGCTGCTGATCAACAAAGATATGCAATGGAGTCAGAGTCTGCAGACAAAACTTCCTCCCTTACAACTGTCAGCAAAGTGTTATCGAATTCTACGGGTAGTGATAAAGAATCCAAGTCTGAAATAATTGAAGGCAGGAGTGATTTTTCACTACCACACCTGCATGTGAAGACTCCAAAACTAAATAATTCTGTTAAAAAGGGAAAAGTTCGTGCTAATCCTGCGGATGGTCTTAAAGCTGAGGTGACAGCCAACCGATTGCAGGTGTCATCTATCAAAAACAAAAAAGTAGAAGGTTCTTCCAATGGGCGGTTTGAAGCAGTTCAGGAGAAACTTAATGAGTTGCTGGATGGAGATGGGGGAATAAGCAAAAGAAAAGATGCCACCAAAGGCTACTTGAAGCTTTTGCTTCTTACTGTGGCATCTGGCGATAGAAGCAATGGTGAAGCAATTCAGAGCAATCGAGATCTTTCCATGATTCTTGATGCCCTTCTGAAAACAAAATCTAGAGCAGTGCTGAATGATATAATTAACAAAAATGGTTTACAGATGTTACATAACATAATGAAGCAGTACAGGCAGGACTTCAAAAAAATCCCGATACTACGGAAGCTTCTTAAGGTCTTAGAGTACCTAGCAGCAAGCAAGATATTGACATCTGAACATATCAATGGTGGTCCTCCTTGTCATGGAATGGAGAGCTTTCGGGAGTCAATGCTGTCTCTGACAGAGCATGATGACAAACAGGTCCATCAAATTGCTCGAAGCTTCCGAGACAGATGGATTCCCAGACCTGTCAGAAAACATGGCTATATGGACAGGGATGATAATAGGGTGGAATCTCACAGAAGTTTCAACTGTAACAGATTTTCAGCATCACACAATCATAGGCATGAGCAGGATTCAAGACCTACAGAAGCAATTGATTGTGGTCAGCAGTCAATGGTTGTGACAACTTCAGTAGATGCTGCTACCCCGGAGGGCTGCTCTACACTGTCTACAGATAGGGTTGAAATCAAAGGGACCAAAAAACGTAAGCGCAAAAGCCGATGGGATCAACCAGCAGAAACAAATTCACATTCTGATGCAGTTATTAGTTCTACTGATGAAAGCCAGAATATTCATGAAGATGTTCCACCAGGATTTTCATGTCCAATACGTTCATTAAATGCTTCACTAAACTCTGGTGATCCTGCTTTGCAGAATGCAAGCCATTCCGGATGTCCCTCTGATTTAGTTATTGGTCATCCAAAAGAGAAATTTAACTCTCGCTTGCCTGTCTCATATGGAATTCCATGGTCTGTTGTCCAGCAATATGGAACACCGCATGCTGAAATCACAGGGTGTTGGGTCACTGCACCTGGCATGCCTTTCAACCCATTTCCCCCCCTACCCCCATATCCACGGGATGACAAAGACTGTCAACCTTCTAATACTACTAATGCCATGACAATTGACAAGCCTGCTGAAGTTCAGCAGTGTGATACTAGTGGTCTGGTTAATTGTTGCTCAGATGATATGATTCCTAGCACAACTGGTTCTAACCCTGAAGACATGAACCTTCCATGTGAGGACGATAAACATGATACTAAACGATTGAAGGATGACTCCAATGATTTGGGAAGGAGGTACTTTAGACAGCAGAAATGGAATAATTCAAAATACATCGACCATGGTTTAGGAGGAATGGATCAAAAGGTAATGGGAACAACTCTAATGGTGAGATGTGCAGTATAG 5853 0.4186 MGSCGESAIDDDSLGGSVVEKHMCSEIPVQLVSVQKSCSEEARNVLDSNVDLSDMADGCIGEGYEGSASFVDVTEGSRDVLANECENADVSRLEKTAEDDCQNCLGICCEDSEVSCLKGGGFSSEGNFQDEGTTATNSLQKHCAQQGEQKDDRSNILLSAGDGSGVMEGKNDDTGLLADAFNCALDSRHSEMSSEPEYMADLLVDCNPQNEPEEIMRNADTLSKVEEKCNALDGMEADACRKMSPSQGMEVLSGALCTDTEVKSTSDELCDQKEGEDWNSTCEEKAKAVIDKEITIDSDVQVSFSQGCHRTLGSLPVVDSVCEPTLLDPGNEMKNGILQIEDNFCKLKDCSAEGPANSTFNKPFYPESGHPSVVLITNSSSKDVPDLLSNGDDVSINNNSAVDNSGQTNNDGKEAVEVDCITESIQLPSQRNSRRTKFGCKTQTKKASRKCKNKAGVTHPGGGMKINLEASRKKRSCLSKPARSSIWGLLGNIKQFFPQDNKIEVSEAMCRELGKARSKRQGGKAIKNSANSSSLNSVQKYSVSTSTTRVRLKIKFGKEIDLSSSNVLIPEAVGGLASASYLGSDLGSQKVASNAEDRISEVVALGNLESFKTDLDKDGLVLNGQIANCHLQNTEITEKSDGDTEEPCLEVPPQKEVEALHKPMNDKAMDPGTSPDSEVINSVPEVQVGERHEEDVHHAVLGSSKEFNSNLDVIISERGKKKDKLICSGNYITEDGSQGPTGKNRAKQSKNRRRKKNCSDAVSSMELPTSTEISKSVNSKELSTESLPLSGVIEFGGSTEALKDKSHMEVETTCKPSVDHGFSEYQGSENLLCSARSLGRKLPKSLQPSKVSKAKPKASDSMSRKKTSSRRKEKQKKPISKSEVKGKGVSLKVKCEVEDHPHPAGVVGNHKVDAVGKNNASDNRVSVNVSNLDMLPGVGLGEQHLSPRNAWVRCDDCHKWRRIQAVLADRIDETNCNWTCKDSSDKEFADCSIPQEKSNAEINAELGLSDASGEEDVYEDSKNYKELGYRRPFVSQESTFTRIFTNEFLHRSRKTQTIDEIMVCHCKPPQEGRLGCGDECLNRMLNIECVQGTCPCGDCCSNQQFQKRKYASLKWFKCGKKGYGLKAVEDVAKGQFLIEYVGEVLDMQAYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKKGEELTFDYNYVRVFGAAAKKCYCGSPHCRGYIGGGDPLNAELIVQGDSDEEFPEPVMLNRDGDIEDSVPIPEYFDNVDTLSSKYLLKDRDVLDKSTTATDANGSPEKESSMNPASAVSLLHSSVEVNDSKGKLPSSIRTEEISLQMEDITSKRMAADQQRYAMESESADKTSSLTTVSKVLSNSTGSDKESKSEIIEGRSDFSLPHLHVKTPKLNNSVKKGKVRANPADGLKAEVTANRLQVSSIKNKKVEGSSNGRFEAVQEKLNELLDGDGGISKRKDATKGYLKLLLLTVASGDRSNGEAIQSNRDLSMILDALLKTKSRAVLNDIINKNGLQMLHNIMKQYRQDFKKIPILRKLLKVLEYLAASKILTSEHINGGPPCHGMESFRESMLSLTEHDDKQVHQIARSFRDRWIPRPVRKHGYMDRDDNRVESHRSFNCNRFSASHNHRHEQDSRPTEAIDCGQQSMVVTTSVDAATPEGCSTLSTDRVEIKGTKKRKRKSRWDQPAETNSHSDAVISSTDESQNIHEDVPPGFSCPIRSLNASLNSGDPALQNASHSGCPSDLVIGHPKEKFNSRLPVSYGIPWSVVQQYGTPHAEITGCWVTAPGMPFNPFPPLPPYPRDDKDCQPSNTTNAMTIDKPAEVQQCDTSGLVNCCSDDMIPSTTGSNPEDMNLPCEDDKHDTKRLKDDSNDLGRRYFRQQKWNNSKYIDHGLGGMDQKVMGTTLMVRCAV 1950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi551g00015 1950 MobiDBLite consensus disorder prediction 731 783 - -
Sebi551g00015 1950 SMART PostSET_3 1236 1252 IPR003616 -
Sebi551g00015 1950 MobiDBLite consensus disorder prediction 1694 1708 - -
Sebi551g00015 1950 Pfam AWS domain 1074 1108 IPR006560 GO:0005634|GO:0042054
Sebi551g00015 1950 FunFam Histone-lysine N-methyltransferase 943 1004 - -
Sebi551g00015 1950 MobiDBLite consensus disorder prediction 1892 1909 - -
Sebi551g00015 1950 SMART shorttest3 1059 1110 IPR006560 GO:0005634|GO:0042054
Sebi551g00015 1950 ProSiteProfiles Zinc finger CW-type profile. 945 999 IPR011124 GO:0008270
Sebi551g00015 1950 ProSiteProfiles Post-SET domain profile. 1236 1252 IPR003616 -
Sebi551g00015 1950 PANTHER SET DOMAIN PROTEINS 447 1729 - -
Sebi551g00015 1950 MobiDBLite consensus disorder prediction 1694 1753 - -
Sebi551g00015 1950 SUPERFAMILY SET domain 1043 1249 IPR046341 -
Sebi551g00015 1950 CDD SET_SETD2 1110 1252 IPR044437 GO:0010452|GO:0046975
Sebi551g00015 1950 Gene3D - 941 1004 - -
Sebi551g00015 1950 Gene3D SET domain 1005 1260 IPR046341 -
Sebi551g00015 1950 MobiDBLite consensus disorder prediction 1883 1909 - -
Sebi551g00015 1950 Pfam SET domain 1122 1228 IPR001214 GO:0005515
Sebi551g00015 1950 ProSiteProfiles SET domain profile. 1111 1228 IPR001214 GO:0005515
Sebi551g00015 1950 MobiDBLite consensus disorder prediction 762 783 - -
Sebi551g00015 1950 SMART set_7 1111 1234 IPR001214 GO:0005515
Sebi551g00015 1950 MobiDBLite consensus disorder prediction 1728 1746 - -
Sebi551g00015 1950 MobiDBLite consensus disorder prediction 843 887 - -
Sebi551g00015 1950 MobiDBLite consensus disorder prediction 1315 1334 - -
Sebi551g00015 1950 FunFam Histone-lysine N-methyltransferase 1010 1267 - -
Sebi551g00015 1950 MobiDBLite consensus disorder prediction 731 745 - -
Sebi551g00015 1950 ProSiteProfiles AWS domain profile. 1059 1109 IPR006560 GO:0005634|GO:0042054
Sebi551g00015 1950 MobiDBLite consensus disorder prediction 391 411 - -
Sebi551g00015 1950 Pfam CW-type Zinc Finger 951 997 IPR011124 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi551g00015 Sebi-Chr551 215809 229820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi551g00015 1094 1251 C2H2 Transcription Factor Family AT2G23740 33.702 4.51e-21 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi551g00015 SET 7.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi551g00015 - - gmx:100795379 2769.57