Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi551g00007 ATGCGCTGCATTTCCTGCGATGAGGAGTACGACCCTGACGACGCCGGAACCTGCAAGGAGTGCTACGATGAAGCCAACGAGACCAGGGAAGAACTCAAGCGTCAGATCCAAGACTTGAAGTCTAAGGTTTCCTTCCTCGCCCTCTCTTCTCCCCTCGACGCTCCTTCCACCACCGATCTCGTCCTCGTTCCCTCCGCTGATGCTTCCGCTCCCTCCGTTCCCGCTCACAAGGCCGTTCTGGTTAGTCGCTCTCCAGTTTTCAGAGCCATGCTGGAGAATGACATGGAGGAAAGCCGGAGTGGCACCATCAAGATCACTGATGTATCATATGATGCTCTTCGTGCTTTTGTTAATTATTTATACACTGCTGAGGCATGCCTTGATAACCAAATGGCCTGTAACCTATTGGTTTTAGCAGAAAAGTATCAGGTGAAACATCTTAAGATATATTGTGAGAAGTATTTGATCGCCAAACTGAATTGGGAAAAAGCTATTGCAAACTATGCCTTTGCACATCAACACAATGCGAACCAATTGCTAGATGCAGCCTTGGCCGTGATCATAGACAACATGGACCGCCTCACTAAAAATGAAGATTATATGGAGCTGGTGGACAGTAATCCTCGTCTTGTTGTGGAAATTTATGAAGCATATCTTGCCAAACAGGTTAATACTGCAGCTACACTTAGGCAATAG 696 0.4713 MRCISCDEEYDPDDAGTCKECYDEANETREELKRQIQDLKSKVSFLALSSPLDAPSTTDLVLVPSADASAPSVPAHKAVLVSRSPVFRAMLENDMEESRSGTIKITDVSYDALRAFVNYLYTAEACLDNQMACNLLVLAEKYQVKHLKIYCEKYLIAKLNWEKAIANYAFAHQHNANQLLDAALAVIIDNMDRLTKNEDYMELVDSNPRLVVEIYEAYLAKQVNTAATLRQ 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi551g00007 231 ProSiteProfiles BTB domain profile. 58 129 IPR000210 GO:0005515
Sebi551g00007 231 PANTHER SPECKLE-TYPE POZ PROTEIN 24 224 - -
Sebi551g00007 231 Pfam BTB/POZ domain 53 158 IPR000210 GO:0005515
Sebi551g00007 231 CDD BACK 168 203 - -
Sebi551g00007 231 Gene3D - 161 231 - -
Sebi551g00007 231 SMART BTB_4 58 159 IPR000210 GO:0005515
Sebi551g00007 231 FunFam BTB/POZ domain-containing protein 161 230 - -
Sebi551g00007 231 Gene3D Potassium Channel Kv1.1; Chain A 25 160 IPR011333 -
Sebi551g00007 231 SUPERFAMILY POZ domain 55 156 IPR011333 -
Sebi551g00007 231 Coils Coil 18 49 - -
Sebi551g00007 231 CDD BTB_POZ_ZBTB_KLHL-like 72 142 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Sebi551g00007 BTB 7e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi551g00007 K10523 - cave:132184304 338.961